BACSU:ZUR

Species (Taxon ID)	Bacillus subtilis (strain 168). (224308)
Gene Name(s)	zur (synonyms: yqfV)
Protein Name(s)	Zinc-specific metallo-regulatory protein
External Links
UniProt	P54479
EMBL	D84432 AL009126
PIR	H69954
RefSeq	NP_390389.2
ProteinModelPortal	P54479
SMR	P54479
STRING	224308.BSU25100
PaxDb	P54479
EnsemblBacteria	CAB14440
GeneID	937968
KEGG	bsu:BSU25100
PATRIC	18976856
GenoList	BSU25100
eggNOG	COG0735
HOGENOM	HOG000014143
InParanoid	P54479
KO	K02076
OMA	FEIYGTC
OrthoDB	EOG6J48SS
PhylomeDB	P54479
BioCyc	BSUB:BSU25100-MONOMER
Proteomes	UP000001570
GO	GO:0005737 GO:0003677 GO:0046872 GO:0003700 GO:0006351
Gene3D	1.10.10.10
InterPro	IPR002481 IPR011991
Pfam	PF01475

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	PMID:19648245^[1]	ECO:0005661	rapid amplification of cDNA ends polymerase chain reaction evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	PMID:12426338^[2]	ECO:0005657	primer extension assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	PMID:19648245^[1]	ECO:0005653	northern assay evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0032993	protein-DNA complex	PMID:18344368^[3]	ECO:0005667	site-directed mutagenesis evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0032993	protein-DNA complex	PMID:9811636^[4]	ECO:0005631	DNAse footprinting evidence used in manual assertion	RefSeq:NC_000964.3	C	Seeded From UniProt	complete
part_of	GO:0032993	protein-DNA complex	PMID:12426338^[2]	ECO:0005631	DNAse footprinting evidence used in manual assertion	RefSeq:NC_000964.3	C	Seeded From UniProt	complete
part_of	GO:0032993	protein-DNA complex	PMID:9811636^[4]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0032993	protein-DNA complex	PMID:19648245^[1]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0032993	protein-DNA complex	PMID:18344368^[3]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0032993	protein-DNA complex	PMID:12426338^[2]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0001217	DNA-binding transcription repressor activity	PMID:18344368^[3]	ECO:0005667	site-directed mutagenesis evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0001217	DNA-binding transcription repressor activity	PMID:9811636^[4]	ECO:0005631	DNAse footprinting evidence used in manual assertion	RefSeq:NC_000964.3	F	Seeded From UniProt	complete
enables	GO:0001217	DNA-binding transcription repressor activity	PMID:12426338^[2]	ECO:0005631	DNAse footprinting evidence used in manual assertion	RefSeq:NC_000964.3	F	Seeded From UniProt	complete
enables	GO:0001217	DNA-binding transcription repressor activity	PMID:9811636^[4]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0001217	DNA-binding transcription repressor activity	PMID:19648245^[1]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0001217	DNA-binding transcription repressor activity	PMID:18344368^[3]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0001217	DNA-binding transcription repressor activity	PMID:12426338^[2]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding	PMID:18344368^[3]	ECO:0005667	site-directed mutagenesis evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding	PMID:9811636^[4]	ECO:0005631	DNAse footprinting evidence used in manual assertion	RefSeq:NC_000964.3	F	Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding	PMID:12426338^[2]	ECO:0005631	DNAse footprinting evidence used in manual assertion	RefSeq:NC_000964.3	F	Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding	PMID:9811636^[4]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding	PMID:19648245^[1]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding	PMID:18344368^[3]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding	PMID:12426338^[2]	ECO:0001807	electrophoretic mobility shift assay evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:1900376	regulation of secondary metabolite biosynthetic process	PMID:21873635^[5]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002112386 UniProtKB:Q9HT74	P	Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	PMID:21873635^[5]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10359 PANTHER:PTN002112386 UniProtKB:P0A0S8 UniProtKB:P0C6C8 UniProtKB:P54479 UniProtKB:P54574 UniProtKB:P74739 UniProtKB:P9WN85 UniProtKB:Q03456 UniProtKB:Q7BR72 UniProtKB:Q7CQY3 UniProtKB:Q8EFN3 UniProtKB:Q8PAL3 UniProtKB:Q8Y5U9 UniProtKB:Q9HT74 UniProtKB:Q9L2H5	P	Seeded From UniProt	complete
enables	GO:0044212	transcription regulatory region DNA binding	PMID:21873635^[5]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002112386 UniProtKB:Q03456	F	Seeded From UniProt	complete
enables	GO:0008270	zinc ion binding	PMID:21873635^[5]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10359 PANTHER:PTN002112386 UniProtKB:P9WN85	F	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	PMID:21873635^[5]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002112386 UniProtKB:P9WN87	F	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	PMID:21873635^[5]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002112386 UniProtKB:Q9HT74	F	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002481	F	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002481	P	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F	Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Gabriel, SE & Helmann, JD (2009) Contributions of Zur-controlled ribosomal proteins to growth under zinc starvation conditions. J. Bacteriol. 191 6116-22 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 Gaballa, A et al. (2002) Functional analysis of the Bacillus subtilis Zur regulon. J. Bacteriol. 184 6508-14 PubMed GONUTS page
↑ ^3.0 ^3.1 ^3.2 ^3.3 ^3.4 ^3.5 Gabriel, SE et al. (2008) Regulation of the Bacillus subtilis yciC gene and insights into the DNA-binding specificity of the zinc-sensing metalloregulator Zur. J. Bacteriol. 190 3482-8 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 Gaballa, A & Helmann, JD (1998) Identification of a zinc-specific metalloregulatory protein, Zur, controlling zinc transport operons in Bacillus subtilis. J. Bacteriol. 180 5815-21 PubMed GONUTS page
↑ ^5.0 ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:19648245-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Gabriel, SE & Helmann, JD (2009) Contributions of Zur-controlled ribosomal proteins to growth under zinc starvation conditions. J. Bacteriol. 191 6116-22 PubMed GONUTS page

[PMID:12426338-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 Gaballa, A et al. (2002) Functional analysis of the Bacillus subtilis Zur regulon. J. Bacteriol. 184 6508-14 PubMed GONUTS page

[PMID:18344368-3] 3.0 ^3.1 ^3.2 ^3.3 ^3.4 ^3.5 Gabriel, SE et al. (2008) Regulation of the Bacillus subtilis yciC gene and insights into the DNA-binding specificity of the zinc-sensing metalloregulator Zur. J. Bacteriol. 190 3482-8 PubMed GONUTS page

[PMID:9811636-4] 4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 Gaballa, A & Helmann, JD (1998) Identification of a zinc-specific metalloregulatory protein, Zur, controlling zinc transport operons in Bacillus subtilis. J. Bacteriol. 180 5815-21 PubMed GONUTS page

[PMID:21873635-5] 5.0 ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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BACSU:ZUR

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