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BACSU:YCIB
Contents
Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
Gene Name(s) | yciB | |
Protein Name(s) | Putative L,D-transpeptidase YciB | |
External Links | ||
UniProt | C0SP99 | |
EMBL | D50453 AL009126 | |
PIR | A69760 | |
RefSeq | NP_388217.2 WP_003246380.1 | |
STRING | 224308.Bsubs1_010100001868 | |
TCDB | 9.B.10.1.1 | |
PaxDb | C0SP99 | |
EnsemblBacteria | CAB12129 | |
GeneID | 938318 | |
KEGG | bsu:BSU03350 | |
PATRIC | 18972229 | |
GenoList | BSU03350 | |
eggNOG | COG1376 | |
HOGENOM | HOG000288930 | |
InParanoid | C0SP99 | |
OMA | CIRLTIP | |
OrthoDB | EOG6BKJ78 | |
PhylomeDB | C0SP99 | |
BioCyc | BSUB:BSU03350-MONOMER | |
UniPathway | UPA00219 | |
Proteomes | UP000001570 | |
GO | GO:0005886 GO:0016787 GO:0016757 GO:0071555 GO:0009252 GO:0008360 | |
InterPro | IPR005490 | |
Pfam | PF03734 | |
PROSITE | PS51257 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0051286 |
cell tip |
ECO:0000314 |
C |
Figure 5A shows a flagged YciB being expressed in Bacillus subtilis and analyzed via immunofluorescence. The arrows within the figure are locating areas with a main concentration of Ycib-FLAG. These locations are near areas of division and cell poles. |
complete | |||||
enables |
GO:0071972 |
peptidoglycan L,D-transpeptidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11253 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0018104 |
peptidoglycan-protein cross-linking |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12682 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005576 |
extracellular region |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001255072 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0071972 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0016740 |
transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016757 |
transferase activity, transferring glycosyl groups |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008360 |
regulation of cell shape |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071555 |
cell wall organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009252 |
peptidoglycan biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0573 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Bramkamp, M (2010) The putative Bacillus subtilis L,D-transpeptidase YciB is a lipoprotein that localizes to the cell poles in a divisome-dependent manner. Arch. Microbiol. 192 57-68 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page