GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
BACSU:ROCA2
Contents
Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
Gene Name(s) | putC (ECO:0000303 with PMID:22139509[1]) (synonyms: ycgN) | |
Protein Name(s) | 1-pyrroline-5-carboxylate dehydrogenase 2 (ECO:0000305)
P5C dehydrogenase 2 (ECO:0000305) L-glutamate gamma-semialdehyde dehydrogenase (ECO:0000255 with HAMAP-Rule:MF_00733) | |
External Links | ||
UniProt | P94391 | |
EMBL | D50453 AL009126 | |
PIR | A69759 | |
RefSeq | NP_388203.2 WP_003234655.1 | |
ProteinModelPortal | P94391 | |
SMR | P94391 | |
STRING | 224308.BSU03210 | |
jPOST | P94391 | |
PaxDb | P94391 | |
PRIDE | P94391 | |
EnsemblBacteria | CAB12115 | |
GeneID | 938333 | |
KEGG | bsu:BSU03210 | |
PATRIC | fig|224308.179.peg.335 | |
eggNOG | ENOG4105C26 COG1012 | |
HOGENOM | HOG000271511 | |
InParanoid | P94391 | |
KO | K00294 | |
OMA | ADPHVPF | |
PhylomeDB | P94391 | |
BioCyc | BSUB:BSU03210-MONOMER | |
UniPathway | UPA00261 | |
Proteomes | UP000001570 | |
GO | GO:0009898 GO:0003842 GO:0016620 GO:0006537 GO:0010133 GO:0006560 | |
CDD | cd07124 | |
Gene3D | 3.40.309.10 3.40.605.10 | |
HAMAP | MF_00733 | |
InterPro | IPR016161 IPR016163 IPR016160 IPR029510 IPR016162 IPR015590 IPR005932 | |
Pfam | PF00171 | |
SUPFAM | SSF53720 | |
TIGRFAMs | TIGR01237 | |
PROSITE | PS00070 PS00687 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0010133 |
proline catabolic process to glutamate |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10801 |
P |
Seeded From UniProt |
|||
part_of |
GO:0009898 |
cytoplasmic side of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10801 |
C |
Seeded From UniProt |
|||
involved_in |
GO:0006560 |
proline metabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10801 |
P |
Seeded From UniProt |
|||
enables |
GO:0003842 |
1-pyrroline-5-carboxylate dehydrogenase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10801 |
F |
Seeded From UniProt |
|||
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR015590 |
F |
Seeded From UniProt |
|||
enables |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR015590 |
P |
Seeded From UniProt |
|||
involved_in |
GO:0006537 |
glutamate biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000099061 |
P |
Seeded From UniProt |
|||
enables |
GO:0003842 |
1-pyrroline-5-carboxylate dehydrogenase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000099061 |
F |
Seeded From UniProt |
|||
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
||||
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
GO:0004657 |
proline dehydrogenase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Evidence for proline dehydrogenase is in the text, not a figure or table "The addition of L-proline to B. subtilis cultures grown in SMM increased PRODH activity 5-fold from 0.48 ± 0.05 U (mg protein−1) to 2.69 ± 0.21 U (mg protein−1). This increase in PRODH activity was abolished in a putB mutant that possessed an activity of 0.46 ± 0.02 U (mg protein−1) in cells grown in the absence of L-proline and 0.45 ± 0.02 U (mg protein−1) in cells cultivated in the presence of L-proline." |
complete | ||||
involved_in |
GO:0010133 |
proline catabolic process to glutamate |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00261 |
P |
Seeded From UniProt |
|||
involved_in |
GO:0010133 |
proline catabolic process to glutamate |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10801 |
P |
Seeded From UniProt |
|||
part_of |
GO:0009898 |
cytoplasmic side of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10801 |
C |
Seeded From UniProt |
|||
involved_in |
GO:0006560 |
proline metabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10801 |
P |
Seeded From UniProt |
|||
enables |
GO:0003842 |
1-pyrroline-5-carboxylate dehydrogenase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10801 |
F |
Seeded From UniProt |
|||
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR015590 |
F |
Seeded From UniProt |
|||
enables |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR015590 |
P |
Seeded From UniProt |
|||
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
||||
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0010133 |
proline catabolic process to glutamate |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00261 |
P |
Seeded From UniProt |
|||
involved_in |
GO:0006537 |
glutamate biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000099061 |
P |
Seeded From UniProt |
|||
enables |
GO:0003842 |
1-pyrroline-5-carboxylate dehydrogenase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000099061 |
F |
Seeded From UniProt |
| ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Moses, S et al. (2012) Proline utilization by Bacillus subtilis: uptake and catabolism. J. Bacteriol. 194 745-58 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page