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BACSU:LIPC
Contents
| Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
| Gene Name(s) | lipC (synonyms: ycsK) | |
| Protein Name(s) | Spore germination lipase LipC | |
| External Links | ||
| UniProt | P42969 | |
| EMBL | D38161 D50453 AL009126 | |
| PIR | I39900 | |
| RefSeq | NP_388292.1 WP_003234415.1 | |
| ProteinModelPortal | P42969 | |
| STRING | 224308.BSU04110 | |
| PaxDb | P42969 | |
| EnsemblBacteria | CAB12218 | |
| GeneID | 938249 | |
| KEGG | bsu:BSU04110 | |
| PATRIC | 18972400 | |
| GenoList | BSU04110 | |
| eggNOG | COG2755 | |
| HOGENOM | HOG000008743 | |
| InParanoid | P42969 | |
| OMA | LERCHED | |
| OrthoDB | EOG61S30G | |
| PhylomeDB | P42969 | |
| BioCyc | BSUB:BSU04110-MONOMER | |
| Proteomes | UP000001570 | |
| GO | GO:0031160 GO:0016788 GO:0006629 GO:0030435 | |
| Gene3D | 3.40.50.1110 | |
| InterPro | IPR001087 IPR013831 | |
| Pfam | PF00657 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0016042 |
lipid catabolic process |
ECO:0000314 |
P |
Figure 6 shows an SDS & zymography assay performed using an empty vector, a vector with YtsK, and bovine serum albumin. Lane 2 is YtsK's SDS and shows the protein's molecular weight. Lane 5 is YtsK's zymography assay and it shows lysis activity at the same kDa as in the SDS indicating YtsK has lypolytic activity. The control's zymogen assay showed no activity. |
complete | |||||
|
involved_in |
GO:0016042 |
lipid catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004622 |
lysophospholipase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11542 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030435 |
sporulation resulting in formation of a cellular spore |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031160 |
spore wall |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Masayama, A et al. (2007) A novel lipolytic enzyme, YcsK (LipC), located in the spore coat of Bacillus subtilis, is involved in spore germination. J. Bacteriol. 189 2369-75 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
