GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
BACSU:GABT
Contents
Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
Gene Name(s) | gabT (synonyms: ycnG) | |
Protein Name(s) | Probable 4-aminobutyrate aminotransferase
(S)-3-amino-2-methylpropionate transaminase GABA aminotransferase GABA-AT Gamma-amino-N-butyrate transaminase GABA transaminase Glutamate:succinic semialdehyde transaminase L-AIBAT | |
External Links | ||
UniProt | P94427 | |
EMBL | D50453 AL009126 | |
PIR | C69764 | |
RefSeq | NP_388272.1 WP_003234459.1 | |
ProteinModelPortal | P94427 | |
SMR | P94427 | |
STRING | 224308.BSU03900 | |
PaxDb | P94427 | |
EnsemblBacteria | CAB12198 | |
GeneID | 938264 | |
KEGG | bsu:BSU03900 | |
PATRIC | 18972354 | |
GenoList | BSU03900 | |
eggNOG | COG0160 | |
HOGENOM | HOG000020206 | |
InParanoid | P94427 | |
KO | K07250 | |
OMA | NLCAEAN | |
OrthoDB | EOG6QVRHN | |
PhylomeDB | P94427 | |
BioCyc | BSUB:BSU03900-MONOMER | |
UniPathway | UPA00733 | |
Proteomes | UP000001570 | |
GO | GO:0047298 GO:0003867 GO:0030170 GO:0009450 | |
Gene3D | 3.40.640.10 3.90.1150.10 | |
InterPro | IPR004632 IPR005814 IPR015424 IPR015421 IPR015422 | |
PANTHER | PTHR11986 | |
Pfam | PF00202 | |
PIRSF | PIRSF000521 | |
SUPFAM | SSF53383 | |
TIGRFAMs | TIGR00700 | |
PROSITE | PS00600 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0003867 |
4-aminobutyrate transaminase activity |
ECO:0000315 |
F |
table1. deletion of gabT gene causes cell to be unable to use GABA as sole nitrogen source. |
complete | |||||
enables |
GO:0003867 |
4-aminobutyrate transaminase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0030170 |
pyridoxal phosphate binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10361 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009450 |
gamma-aminobutyric acid catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10361 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10361 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003867 |
4-aminobutyrate transaminase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10361 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003867 |
4-aminobutyrate transaminase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008483 |
transaminase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009448 |
gamma-aminobutyric acid metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0030170 |
pyridoxal phosphate binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0034386 |
4-aminobutyrate:2-oxoglutarate transaminase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0047298 |
(S)-3-amino-2-methylpropionate transaminase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008483 |
transaminase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009450 |
gamma-aminobutyric acid catabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00733 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Belitsky, BR & Sonenshein, AL (2002) GabR, a member of a novel protein family, regulates the utilization of gamma-aminobutyrate in Bacillus subtilis. Mol. Microbiol. 45 569-83 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page