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BACSU:GABT

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Species (Taxon ID) Bacillus subtilis (strain 168). (224308)
Gene Name(s) gabT (synonyms: ycnG)
Protein Name(s) Probable 4-aminobutyrate aminotransferase

(S)-3-amino-2-methylpropionate transaminase GABA aminotransferase GABA-AT Gamma-amino-N-butyrate transaminase GABA transaminase Glutamate:succinic semialdehyde transaminase L-AIBAT

External Links
UniProt P94427
EMBL D50453
AL009126
PIR C69764
RefSeq NP_388272.1
WP_003234459.1
ProteinModelPortal P94427
SMR P94427
STRING 224308.BSU03900
PaxDb P94427
EnsemblBacteria CAB12198
GeneID 938264
KEGG bsu:BSU03900
PATRIC 18972354
GenoList BSU03900
eggNOG COG0160
HOGENOM HOG000020206
InParanoid P94427
KO K07250
OMA NLCAEAN
OrthoDB EOG6QVRHN
PhylomeDB P94427
BioCyc BSUB:BSU03900-MONOMER
UniPathway UPA00733
Proteomes UP000001570
GO GO:0047298
GO:0003867
GO:0030170
GO:0009450
Gene3D 3.40.640.10
3.90.1150.10
InterPro IPR004632
IPR005814
IPR015424
IPR015421
IPR015422
PANTHER PTHR11986
Pfam PF00202
PIRSF PIRSF000521
SUPFAM SSF53383
TIGRFAMs TIGR00700
PROSITE PS00600

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0003867

4-aminobutyrate transaminase activity

PMID:12123465[1]

ECO:0000315

F

table1. deletion of gabT gene causes cell to be unable to use GABA as sole nitrogen source.

complete
CACAO 8944

enables

GO:0003867

4-aminobutyrate transaminase activity

PMID:12123465[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0030170

pyridoxal phosphate binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10361
EcoGene:EG13187
PANTHER:PTN000944876
PomBase:SPAC19D5.07
UniProtKB:P80147
UniProtKB:P80404

F

Seeded From UniProt

complete

involved_in

GO:0009450

gamma-aminobutyric acid catabolic process

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10361
PANTHER:PTN000944876
PomBase:SPAC19D5.07
SGD:S000003251
UniProtKB:P14010

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10361
PANTHER:PTN000241468

C

Seeded From UniProt

complete

enables

GO:0003867

4-aminobutyrate transaminase activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10361
EcoGene:EG13187
PANTHER:PTN000944876
PomBase:SPAC19D5.07
RGD:620948
SGD:S000003251
UniProtKB:P80147
UniProtKB:P80404
UniProtKB:P94427
UniProtKB:Q9BGI0

F

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015421
InterPro:IPR015422

F

Seeded From UniProt

complete

enables

GO:0003867

4-aminobutyrate transaminase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004632

F

Seeded From UniProt

complete

enables

GO:0008483

transaminase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005814

F

Seeded From UniProt

complete

involved_in

GO:0009448

gamma-aminobutyric acid metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004632

P

Seeded From UniProt

complete

enables

GO:0030170

pyridoxal phosphate binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005814

F

Seeded From UniProt

complete

enables

GO:0034386

4-aminobutyrate:2-oxoglutarate transaminase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.6.1.19

F

Seeded From UniProt

complete

enables

GO:0047298

(S)-3-amino-2-methylpropionate transaminase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.6.1.22

F

Seeded From UniProt

complete

enables

GO:0008483

transaminase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0032

F

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

involved_in

GO:0009450

gamma-aminobutyric acid catabolic process

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00733

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Belitsky, BR & Sonenshein, AL (2002) GabR, a member of a novel protein family, regulates the utilization of gamma-aminobutyrate in Bacillus subtilis. Mol. Microbiol. 45 569-83 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page