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BACSU:CCPA
Contents
| Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
| Gene Name(s) | ccpA (synonyms: alsA, amyR, graR) | |
| Protein Name(s) | Catabolite control protein A
Glucose-resistance amylase regulator | |
| External Links | ||
| UniProt | P25144 | |
| EMBL | M85182 AF008220 AL009126 | |
| PIR | S15318 | |
| RefSeq | NP_390852.1 | |
| PDB | 1ZVV 2FEP 3OQM 3OQN 3OQO | |
| PDBsum | 1ZVV 2FEP 3OQM 3OQN 3OQO | |
| ProteinModelPortal | P25144 | |
| SMR | P25144 | |
| IntAct | P25144 | |
| MINT | MINT-8363378 | |
| STRING | 224308.BSU29740 | |
| PaxDb | P25144 | |
| EnsemblBacteria | CAB14952 | |
| GeneID | 935942 | |
| KEGG | bsu:BSU29740 | |
| PATRIC | 18977856 | |
| GenoList | BSU29740 | |
| eggNOG | COG1609 | |
| HOGENOM | HOG000220180 | |
| InParanoid | P25144 | |
| KO | K02529 | |
| OMA | VENSCYA | |
| OrthoDB | EOG6SJJMM | |
| PhylomeDB | P25144 | |
| BioCyc | BSUB:BSU29740-MONOMER | |
| EvolutionaryTrace | P25144 | |
| PRO | PR:P25144 | |
| Proteomes | UP000001570 | |
| GO | GO:0003677 GO:0003700 GO:0006351 | |
| Gene3D | 1.10.260.40 | |
| InterPro | IPR006377 IPR010982 IPR028082 IPR000843 | |
| Pfam | PF00356 | |
| PRINTS | PR00036 | |
| SMART | SM00354 | |
| SUPFAM | SSF47413 SSF53822 | |
| TIGRFAMs | TIGR01481 | |
| PROSITE | PS00356 PS50932 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000315 |
P |
Figure 3C shows that “ CcpA acts as negative regulator of yvmB expression.” Organism: Bacillus subtilis |
complete | |||||
|
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000279 |
western blot evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0005657 |
primer extension assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0001807 |
electrophoretic mobility shift assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0001807 |
electrophoretic mobility shift assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0001217 |
DNA-binding transcription repressor activity |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0001217 |
DNA-binding transcription repressor activity |
ECO:0001807 |
electrophoretic mobility shift assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0001216 |
DNA-binding transcription activator activity |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0001216 |
DNA-binding transcription activator activity |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0001216 |
DNA-binding transcription activator activity |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0001216 |
DNA-binding transcription activator activity |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0001216 |
DNA-binding transcription activator activity |
ECO:0001807 |
electrophoretic mobility shift assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0005631 |
DNAse footprinting evidence used in manual assertion |
RefSeq:NC_000964.3 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0001807 |
electrophoretic mobility shift assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0001807 |
electrophoretic mobility shift assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Randazzo, P et al. (2016) The MarR-like protein PchR (YvmB) regulates expression of genes involved in pulcherriminic acid biosynthesis and in the initiation of sporulation in Bacillus subtilis. BMC Microbiol. 16 190 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 Ishii, H et al. (2013) The Bacillus subtilis response regulator gene degU is positively regulated by CcpA and by catabolite-repressed synthesis of ClpC. J. Bacteriol. 195 193-201 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 Kim, HJ et al. (2002) Direct and indirect roles of CcpA in regulation of Bacillus subtilis Krebs cycle genes. Mol. Microbiol. 45 179-90 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 Tojo, S et al. (2005) Elaborate transcription regulation of the Bacillus subtilis ilv-leu operon involved in the biosynthesis of branched-chain amino acids through global regulators of CcpA, CodY and TnrA. Mol. Microbiol. 56 1560-73 PubMed GONUTS page
