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BACSU:CCPA

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Species (Taxon ID) Bacillus subtilis (strain 168). (224308)
Gene Name(s) ccpA (synonyms: alsA, amyR, graR)
Protein Name(s) Catabolite control protein A

Glucose-resistance amylase regulator

External Links
UniProt P25144
EMBL M85182
AF008220
AL009126
PIR S15318
RefSeq NP_390852.1
PDB 1ZVV
2FEP
3OQM
3OQN
3OQO
PDBsum 1ZVV
2FEP
3OQM
3OQN
3OQO
ProteinModelPortal P25144
SMR P25144
IntAct P25144
MINT MINT-8363378
STRING 224308.BSU29740
PaxDb P25144
EnsemblBacteria CAB14952
GeneID 935942
KEGG bsu:BSU29740
PATRIC 18977856
GenoList BSU29740
eggNOG COG1609
HOGENOM HOG000220180
InParanoid P25144
KO K02529
OMA VENSCYA
OrthoDB EOG6SJJMM
PhylomeDB P25144
BioCyc BSUB:BSU29740-MONOMER
EvolutionaryTrace P25144
PRO PR:P25144
Proteomes UP000001570
GO GO:0003677
GO:0003700
GO:0006351
Gene3D 1.10.260.40
InterPro IPR006377
IPR010982
IPR028082
IPR000843
Pfam PF00356
PRINTS PR00036
SMART SM00354
SUPFAM SSF47413
SSF53822
TIGRFAMs TIGR01481
PROSITE PS00356
PS50932

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0045892

negative regulation of transcription, DNA-templated

PMID:27542896[1]

ECO:0000315

P

Figure 3C shows that “ CcpA acts as negative regulator of yvmB expression.” Organism: Bacillus subtilis

complete
CACAO 13176

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:23123903[2]

ECO:0000279

western blot evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:12100558[3]

ECO:0005657

primer extension assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0032993

protein-DNA complex

PMID:23123903[2]

ECO:0005667

site-directed mutagenesis phenotypic evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032993

protein-DNA complex

PMID:15916606[4]

ECO:0005667

site-directed mutagenesis phenotypic evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032993

protein-DNA complex

PMID:23123903[2]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

C

Seeded From UniProt

complete

part_of

GO:0032993

protein-DNA complex

PMID:15916606[4]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

C

Seeded From UniProt

complete

part_of

GO:0032993

protein-DNA complex

PMID:12100558[3]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

C

Seeded From UniProt

complete

part_of

GO:0032993

protein-DNA complex

PMID:23123903[2]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032993

protein-DNA complex

PMID:12100558[3]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0001217

DNA-binding transcription repressor activity

PMID:12100558[3]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

F

Seeded From UniProt

complete

enables

GO:0001217

DNA-binding transcription repressor activity

PMID:12100558[3]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0001216

DNA-binding transcription activator activity

PMID:23123903[2]

ECO:0005667

site-directed mutagenesis phenotypic evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0001216

DNA-binding transcription activator activity

PMID:15916606[4]

ECO:0005667

site-directed mutagenesis phenotypic evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0001216

DNA-binding transcription activator activity

PMID:23123903[2]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

F

Seeded From UniProt

complete

enables

GO:0001216

DNA-binding transcription activator activity

PMID:15916606[4]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

F

Seeded From UniProt

complete

enables

GO:0001216

DNA-binding transcription activator activity

PMID:23123903[2]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:23123903[2]

ECO:0005667

site-directed mutagenesis phenotypic evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:15916606[4]

ECO:0005667

site-directed mutagenesis phenotypic evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:23123903[2]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:15916606[4]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:12100558[3]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:23123903[2]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:12100558[3]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000843
InterPro:IPR010982

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000843
InterPro:IPR006377

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Randazzo, P et al. (2016) The MarR-like protein PchR (YvmB) regulates expression of genes involved in pulcherriminic acid biosynthesis and in the initiation of sporulation in Bacillus subtilis. BMC Microbiol. 16 190 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 Ishii, H et al. (2013) The Bacillus subtilis response regulator gene degU is positively regulated by CcpA and by catabolite-repressed synthesis of ClpC. J. Bacteriol. 195 193-201 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 3.5 3.6 Kim, HJ et al. (2002) Direct and indirect roles of CcpA in regulation of Bacillus subtilis Krebs cycle genes. Mol. Microbiol. 45 179-90 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 4.4 4.5 Tojo, S et al. (2005) Elaborate transcription regulation of the Bacillus subtilis ilv-leu operon involved in the biosynthesis of branched-chain amino acids through global regulators of CcpA, CodY and TnrA. Mol. Microbiol. 56 1560-73 PubMed GONUTS page