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ARATH:SUD1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | SUD1 (synonyms: CER9) | |
| Protein Name(s) | Probable E3 ubiquitin ligase SUD1
Protein ECERIFERUM 9 Protein SUPPRESSOR OF DRY2 DEFFECTS 1 AtSUD1 RING/U-box domain-containing protein | |
| External Links | ||
| UniProt | F4JKK0 | |
| EMBL | AL021961 AL161584 CP002687 CP002687 AK230154 | |
| PIR | T05426 | |
| RefSeq | NP_001119113.1 NP_195136.3 | |
| UniGene | At.28193 | |
| ProteinModelPortal | F4JKK0 | |
| SMR | F4JKK0 | |
| IntAct | F4JKK0 | |
| STRING | 3702.AT4G34100.1 | |
| SwissPalm | F4JKK0 | |
| PaxDb | F4JKK0 | |
| PRIDE | F4JKK0 | |
| EnsemblPlants | [example_ID AT4G34100.1] | |
| GeneID | 829556 | |
| KEGG | ath:AT4G34100 | |
| TAIR | AT4G34100 | |
| eggNOG | KOG1609 COG5183 | |
| HOGENOM | HOG000006013 | |
| InParanoid | F4JKK0 | |
| KO | K10661 | |
| OMA | DNLLADC | |
| UniPathway | UPA00143 | |
| PRO | PR:F4JKK0 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | F4JKK0 | |
| Genevisible | F4JKK0 | |
| GO | GO:0016021 GO:0016874 GO:0004842 GO:0008270 GO:0042335 GO:0010143 GO:0008299 GO:1900490 GO:0009414 GO:0010345 GO:0010025 | |
| Gene3D | 3.30.40.10 | |
| InterPro | IPR011016 IPR013083 | |
| Pfam | PF12906 | |
| SMART | SM00744 | |
| PROSITE | PS51292 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0042335 |
cuticle development |
ECO:0000315 |
P |
Figure 3 shows that cer9 mutants have different cuticle compositions than wild type cuticles. |
complete | |||||
|
involved_in |
GO:0042335 |
cuticle development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:1900490 |
positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010345 |
suberin biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010143 |
cutin biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010025 |
wax biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010025 |
wax biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009414 |
response to water deprivation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
AGI_LocusCode:At1g58440 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0008299 |
isoprenoid biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030433 |
ubiquitin-dependent ERAD pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000322018 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0030176 |
integral component of endoplasmic reticulum membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000322018 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00143 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Lü, S et al. (2012) Arabidopsis ECERIFERUM9 involvement in cuticle formation and maintenance of plant water status. Plant Physiol. 159 930-44 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Doblas, VG et al. (2013) The SUD1 gene encodes a putative E3 ubiquitin ligase and is a positive regulator of 3-hydroxy-3-methylglutaryl coenzyme a reductase activity in Arabidopsis. Plant Cell 25 728-43 PubMed GONUTS page
- ↑ Jenks, MA et al. (1995) Leaf Epicuticular Waxes of the Eceriferum Mutants in Arabidopsis. Plant Physiol. 108 369-377 PubMed GONUTS page
- ↑ 4.0 4.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
