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ARATH:RS102
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | RPS10B | |
| Protein Name(s) | 40S ribosomal protein S10-2 | |
| External Links | ||
| UniProt | Q9FFS8 | |
| EMBL | AB005233 CP002688 AY037240 AF375440 AY060539 | |
| RefSeq | NP_198967.1 | |
| UniGene | At.67807 At.8336 | |
| ProteinModelPortal | Q9FFS8 | |
| SMR | Q9FFS8 | |
| BioGrid | 19405 | |
| IntAct | Q9FFS8 | |
| PaxDb | Q9FFS8 | |
| PRIDE | Q9FFS8 | |
| EnsemblPlants | AT5G41520.1 | |
| GeneID | 834154 | |
| KEGG | ath:AT5G41520 | |
| GeneFarm | 431 | |
| TAIR | AT5G41520 | |
| eggNOG | COG5045 | |
| HOGENOM | HOG000216624 | |
| InParanoid | Q9FFS8 | |
| KO | K02947 | |
| OMA | KQQKPLG | |
| PhylomeDB | Q9FFS8 | |
| Reactome | REACT_187631 REACT_187829 REACT_190931 REACT_232663 REACT_233701 REACT_238761 REACT_240283 REACT_244451 REACT_248654 REACT_262398 | |
| Proteomes | UP000006548 | |
| Genevestigator | Q9FFS8 | |
| GO | GO:0005618 GO:0009507 GO:0005829 GO:0022626 GO:0022627 GO:0010252 GO:0090506 GO:2000032 | |
| InterPro | IPR005326 | |
| Pfam | PF03501 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042788 |
polysomal ribosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:2000032 |
regulation of secondary shoot formation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
AGI_LocusCode:AT2G42620 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0090506 |
axillary shoot meristem initiation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
AGI_LocusCode:AT2G42620 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0022627 |
cytosolic small ribosomal subunit |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0022626 |
cytosolic ribosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0022626 |
cytosolic ribosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010252 |
auxin homeostasis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
AGI_LocusCode:AT2G42620 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005618 |
cell wall |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0022627 |
cytosolic small ribosomal subunit |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000254423 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000254423 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000028 |
ribosomal small subunit assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000254423 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005840 |
ribosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Chang, IF et al. (2005) Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Plant Physiol. 137 848-62 PubMed GONUTS page
- ↑ 2.0 2.1 Carroll, AJ et al. (2008) Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Mol. Cell Proteomics 7 347-69 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Stirnberg, P et al. (2012) Mutation of the cytosolic ribosomal protein-encoding RPS10B gene affects shoot meristematic function in Arabidopsis. BMC Plant Biol. 12 160 PubMed GONUTS page
- ↑ Giavalisco, P et al. (2005) High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Plant Mol. Biol. 57 577-91 PubMed GONUTS page
- ↑ Zybailov, B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS ONE 3 e1994 PubMed GONUTS page
- ↑ Ito, J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. 10 1571-82 PubMed GONUTS page
- ↑ Bayer, EM et al. (2006) Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Proteomics 6 301-11 PubMed GONUTS page
- ↑ Reichel, M et al. (2016) In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Plant Cell 28 2435-2452 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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