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ARATH:RIN4
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | RIN4 | |
| Protein Name(s) | RPM1-interacting protein 4 | |
| External Links | ||
| UniProt | Q8GYN5 | |
| EMBL | AB026647 CP002686 AK117488 | |
| RefSeq | NP_189143.2 | |
| UniGene | At.43082 | |
| PDB | 2NUD | |
| PDBsum | 2NUD | |
| ProteinModelPortal | Q8GYN5 | |
| BioGrid | 7429 | |
| DIP | DIP-53466N | |
| IntAct | Q8GYN5 | |
| PaxDb | Q8GYN5 | |
| PRIDE | Q8GYN5 | |
| EnsemblPlants | AT3G25070.1 | |
| GeneID | 822098 | |
| KEGG | ath:AT3G25070 | |
| TAIR | AT3G25070 | |
| eggNOG | NOG330720 | |
| HOGENOM | HOG000030266 | |
| InParanoid | Q8GYN5 | |
| KO | K13456 | |
| OMA | DWDENNP | |
| PhylomeDB | Q8GYN5 | |
| EvolutionaryTrace | Q8GYN5 | |
| PMAP-CutDB | Q8GYN5 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q8GYN5 | |
| Genevestigator | Q8GYN5 | |
| GO | GO:0012505 GO:0019897 GO:0016020 GO:0005886 GO:0010204 GO:0009816 GO:0034051 GO:0009626 GO:0006468 GO:0002237 | |
| InterPro | IPR008700 | |
| Pfam | PF05627 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0034051 |
negative regulation of plant-type hypersensitive response |
ECO:0000315 |
P |
Fig. 5a. shows the rin4 mutant to have less disease progression than the complement and the wild type. 5B. shows the number of spores from the pathogen to be much higher in the rin4 mutants. 5c. shows the expression of PR-1 a protein directly involved in the plant hypersensitive response is higher in rin4 mutants than it is in wild type (Ws-O) and rin4 complements. |
complete | |||||
|
involved_in |
GO:0034051 |
negative regulation of plant-type hypersensitive response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0034051 |
negative regulation of plant-type hypersensitive response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0019897 |
extrinsic component of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010204 |
defense response signaling pathway, resistance gene-independent |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009816 |
defense response to bacterium, incompatible interaction |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009626 |
plant-type hypersensitive response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0002237 |
response to molecule of bacterial origin |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010204 |
defense response signaling pathway, resistance gene-independent |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002108974 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002108974 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045087 |
innate immune response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006952 |
defense response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0002376 |
immune system process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009626 |
plant-type hypersensitive response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0012505 |
endomembrane system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Mackey, D et al. (2002) RIN4 interacts with Pseudomonas syringae type III effector molecules and is required for RPM1-mediated resistance in Arabidopsis. Cell 108 743-54 PubMed GONUTS page
- ↑ Cui, H et al. (2010) Pseudomonas syringae effector protein AvrB perturbs Arabidopsis hormone signaling by activating MAP kinase 4. Cell Host Microbe 7 164-75 PubMed GONUTS page
- ↑ Elmore, JM et al. (2012) Quantitative proteomics reveals dynamic changes in the plasma membrane during Arabidopsis immune signaling. Mol. Cell Proteomics 11 M111.014555 PubMed GONUTS page
- ↑ 4.0 4.1 Kim, HS et al. (2005) The Pseudomonas syringae effector AvrRpt2 cleaves its C-terminally acylated target, RIN4, from Arabidopsis membranes to block RPM1 activation. Proc. Natl. Acad. Sci. U.S.A. 102 6496-501 PubMed GONUTS page
- ↑ 5.0 5.1 Kim, MG et al. (2005) Two Pseudomonas syringae type III effectors inhibit RIN4-regulated basal defense in Arabidopsis. Cell 121 749-59 PubMed GONUTS page
- ↑ Century, KS et al. (1995) NDR1, a locus of Arabidopsis thaliana that is required for disease resistance to both a bacterial and a fungal pathogen. Proc. Natl. Acad. Sci. U.S.A. 92 6597-601 PubMed GONUTS page
- ↑ Mackey, D et al. (2003) Arabidopsis RIN4 is a target of the type III virulence effector AvrRpt2 and modulates RPS2-mediated resistance. Cell 112 379-89 PubMed GONUTS page
- ↑ Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page
- ↑ Nühse, TS et al. (2003) Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Mol. Cell Proteomics 2 1234-43 PubMed GONUTS page
- ↑ 10.0 10.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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