ARATH:RAA1B

Species (Taxon ID)	Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s)	RABA1B (synonyms: RAB11)
Protein Name(s)	Ras-related protein RABA1b AtRABA1b Ras-related protein Rab11 AtRab11
External Links
UniProt	Q39222
EMBL	L18883 AC051629 CP002684 BT006406 AK227865 AY086881
PIR	S59942
RefSeq	NP_173136.1
UniGene	At.324
ProteinModelPortal	Q39222
SMR	Q39222
STRING	3702.AT1G16920.1-P
PaxDb	Q39222
PRIDE	Q39222
EnsemblPlants	AT1G16920.1
GeneID	838263
KEGG	ath:AT1G16920
TAIR	AT1G16920
eggNOG	COG1100
HOGENOM	HOG000233968
InParanoid	Q39222
KO	K07904
OMA	ESLCFME
PhylomeDB	Q39222
Proteomes	UP000006548
Genevestigator	Q39222
GO	GO:0005886 GO:0005774 GO:0005773 GO:0005525 GO:0042538 GO:0006886 GO:0007264
Gene3D	3.40.50.300
InterPro	IPR027417 IPR005225 IPR001806 IPR003579
Pfam	PF00071
PRINTS	PR00449
SMART	SM00175
SUPFAM	SSF52540
TIGRFAMs	TIGR00231
PROSITE	PS51419

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
	GO:0060627	regulation of vesicle-mediated transport	PMID:22974509^[1]	ECO:0000314			P	Figure 5	complete CACAO 8248
involved_in	GO:0060627	regulation of vesicle-mediated transport	PMID:22974509^[1]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0042538	hyperosmotic salinity response	PMID:22974509^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:22923678^[2]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:17317660^[3]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:15060130^[4]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005774	vacuolar membrane	PMID:17151019^[5]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005773	vacuole	PMID:14760709^[6]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0005525	GTP binding	PMID:8843944^[7]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:0032482	Rab protein signal transduction	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0015790 PANTHER:PTN001292747 RGD:3529 dictyBase:DDB_G0269238	P	Seeded From UniProt	complete
involved_in	GO:0006886	intracellular protein transport	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1914292 PANTHER:PTN001292747 TAIR:locus:2094029 TAIR:locus:2123010 UniProtKB:Q9BW83	P	Seeded From UniProt	complete
part_of	GO:0005768	endosome	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0015790 PANTHER:PTN000633980 SGD:S000000833 SGD:S000003178 TAIR:locus:2024276	C	Seeded From UniProt	complete
enables	GO:0003924	GTPase activity	PMID:21873635^[8]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0015790 FB:FBgn0015797 FB:FBgn0016700 MGI:MGI:104606 MGI:MGI:105072 MGI:MGI:105926 MGI:MGI:1861441 MGI:MGI:1931295 MGI:MGI:2443036 MGI:MGI:99425 PANTHER:PTN001292747 PomBase:SPAC1565.06c PomBase:SPAC4C5.02c PomBase:SPBC1703.10 RGD:3529 RGD:619762 SGD:S000000833 SGD:S000001722 SGD:S000001856 SGD:S000001889 SGD:S000003178 SGD:S000004252 SGD:S000004460 SGD:S000004529 SGD:S000005037 SGD:S000005615 TAIR:locus:2041036 TAIR:locus:2082672 TAIR:locus:2202280 TAIR:locus:505006713 UniProtKB:P20336 UniProtKB:P20337 UniProtKB:P20338 UniProtKB:P20339 UniProtKB:P20340 UniProtKB:P51148 UniProtKB:P51149 UniProtKB:P51151 UniProtKB:P61006 UniProtKB:P61019 UniProtKB:P61020 UniProtKB:P61106 UniProtKB:P62491 UniProtKB:P62820 UniProtKB:Q13637 UniProtKB:Q14088 UniProtKB:Q15286 UniProtKB:Q15907 UniProtKB:Q86YS6 UniProtKB:Q96E17 UniProtKB:Q9H082 UniProtKB:Q9H0N0 UniProtKB:Q9H0T7 UniProtKB:Q9UL25 UniProtKB:Q9UL26 UniProtKB:Q9ULC3 WB:WBGene00004268 WB:WBGene00004271 WB:WBGene00006833	F	Seeded From UniProt	complete
enables	GO:0003924	GTPase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001806	F	Seeded From UniProt	complete
enables	GO:0005525	GTP binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001806 InterPro:IPR005225	F	Seeded From UniProt	complete
involved_in	GO:0006886	intracellular protein transport	PMID:11756458^[9]	ECO:0000304	author statement supported by traceable reference used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0005525	GTP binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0342	F	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-1003 UniProtKB-SubCell:SL-0039	C	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472	C	Seeded From UniProt	complete
involved_in	GO:0015031	protein transport	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0653	P	Seeded From UniProt	complete
enables	GO:0000166	nucleotide binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0547	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 Asaoka, R et al. (2013) Arabidopsis RABA1 GTPases are involved in transport between the trans-Golgi network and the plasma membrane, and are required for salinity stress tolerance. Plant J. 73 240-9 PubMed GONUTS page
↑ Nikolovski, N et al. (2012) Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol. 160 1037-51 PubMed GONUTS page
↑ Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page
↑ Marmagne, A et al. (2004) Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Mol. Cell Proteomics 3 675-91 PubMed GONUTS page
↑ Jaquinod, M et al. (2007) A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Mol. Cell Proteomics 6 394-412 PubMed GONUTS page
↑ Szponarski, W et al. (2004) Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Proteomics 4 397-406 PubMed GONUTS page
↑ Biermann, B et al. (1996) Identification and isoprenylation of plant GTP-binding proteins. Plant Mol. Biol. 31 1021-8 PubMed GONUTS page
↑ ^8.0 ^8.1 ^8.2 ^8.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
↑ Inaba, T et al. (2002) Distinct localization of two closely related Ypt3/Rab11 proteins on the trafficking pathway in higher plants. J. Biol. Chem. 277 9183-8 PubMed GONUTS page

[PMID:22974509-1] 1.0 ^1.1 ^1.2 Asaoka, R et al. (2013) Arabidopsis RABA1 GTPases are involved in transport between the trans-Golgi network and the plasma membrane, and are required for salinity stress tolerance. Plant J. 73 240-9 PubMed GONUTS page

[PMID:22923678-2] Nikolovski, N et al. (2012) Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol. 160 1037-51 PubMed GONUTS page

[PMID:17317660-3] Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page

[PMID:15060130-4] Marmagne, A et al. (2004) Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Mol. Cell Proteomics 3 675-91 PubMed GONUTS page

[PMID:17151019-5] Jaquinod, M et al. (2007) A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Mol. Cell Proteomics 6 394-412 PubMed GONUTS page

[PMID:14760709-6] Szponarski, W et al. (2004) Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Proteomics 4 397-406 PubMed GONUTS page

[PMID:8843944-7] Biermann, B et al. (1996) Identification and isoprenylation of plant GTP-binding proteins. Plant Mol. Biol. 31 1021-8 PubMed GONUTS page

[PMID:21873635-8] 8.0 ^8.1 ^8.2 ^8.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:11756458-9] Inaba, T et al. (2002) Distinct localization of two closely related Ypt3/Rab11 proteins on the trafficking pathway in higher plants. J. Biol. Chem. 277 9183-8 PubMed GONUTS page

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ARATH:RAA1B

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