ARATH:PLDD1

Species (Taxon ID)	Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s)	PLDDELTA
Protein Name(s)	Phospholipase D delta AtPLDdelta PLD delta
External Links
UniProt	Q9C5Y0
EMBL	AF322228 AF274239 AF306345 AB031047 AL031986 AL161588 CP002687 CP002687 AF424632 AK227213
RefSeq	NP_567989.1 NP_849501.1
UniGene	At.22959
ProteinModelPortal	Q9C5Y0
BioGrid	15015
PaxDb	Q9C5Y0
PRIDE	Q9C5Y0
EnsemblPlants	AT4G35790.1
GeneID	829733
KEGG	ath:AT4G35790
TAIR	AT4G35790
eggNOG	COG1502
HOGENOM	HOG000240112
InParanoid	Q9C5Y0
KO	K01115
OMA	RIGRISW
PhylomeDB	Q9C5Y0
BioCyc	ARA:AT4G35790-MONOMER ARA:GQT-485-MONOMER ARA:GQT-486-MONOMER MetaCyc:AT4G35790-MONOMER
Reactome	REACT_185773 REACT_185985 REACT_187648
Proteomes	UP000006548
ExpressionAtlas	Q9C5Y0
Genevestigator	Q9C5Y0
GO	GO:0016020 GO:0005886 GO:0009506 GO:0005773 GO:0005509 GO:0070290 GO:0004630 GO:0016042 GO:0046473 GO:0046470 GO:0009789 GO:0012501 GO:0090333 GO:0009409
Gene3D	2.60.40.150
InterPro	IPR000008 IPR001736 IPR024632 IPR015679 IPR011402
PANTHER	PTHR18896
Pfam	PF00168 PF12357 PF00614
PIRSF	PIRSF036470
SMART	SM00239 SM00155
SUPFAM	SSF49562
PROSITE	PS50004 PS50035

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
	GO:0004630	phospholipase D activity	PMID:11706190^[1]	ECO:0000315			F	Figure 5- Shows phospholipase activity levels in WT and mutated gene	complete CACAO 4258
enables	GO:0004630	phospholipase D activity	PMID:11706190^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:0090333	regulation of stomatal closure	PMID:22932846^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0090333	regulation of stomatal closure	PMID:22392280^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0046473	phosphatidic acid metabolic process	PMID:11489173^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0016020	membrane	PMID:17432890^[5]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
involved_in	GO:0012501	programmed cell death	PMID:14508007^[6]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	PMID:22392280^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0009506	plasmodesma	PMID:21533090^[7]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
involved_in	GO:0009409	response to cold	PMID:15004566^[8]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009409	response to cold	PMID:14535880^[9]	ECO:0000270	expression pattern evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:22923678^[10]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:17644812^[11]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:17317660^[12]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:16618929^[13]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005773	vacuole	PMID:15539469^[14]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0004630	phospholipase D activity	PMID:14508007^[6]	ECO:0000315	mutant phenotype evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0004630	phospholipase D activity	PMID:12397060^[15]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0003824	catalytic activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001736	F	Seeded From UniProt	complete
enables	GO:0004630	phospholipase D activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR011402	F	Seeded From UniProt	complete
enables	GO:0005509	calcium ion binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR011402	F	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR011402	C	Seeded From UniProt	complete
involved_in	GO:0046470	phosphatidylcholine metabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR011402	P	Seeded From UniProt	complete
enables	GO:0070290	N-acylphosphatidylethanolamine-specific phospholipase D activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:3.1.4.4	F	Seeded From UniProt	complete
enables	GO:0004630	phospholipase D activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:3.1.4.4	F	Seeded From UniProt	complete
involved_in	GO:0006629	lipid metabolic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0443	P	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472	C	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-1003 UniProtKB-SubCell:SL-0039	C	Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0378	F	Seeded From UniProt	complete
involved_in	GO:0016042	lipid catabolic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0442	P	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 Wang, C & Wang, X (2001) A novel phospholipase D of Arabidopsis that is activated by oleic acid and associated with the plasma membrane. Plant Physiol. 127 1102-12 PubMed GONUTS page
↑ Distéfano, AM et al. (2012) Phospholipase Dδ is involved in nitric oxide-induced stomatal closure. Planta 236 1899-907 PubMed GONUTS page
↑ ^3.0 ^3.1 Uraji, M et al. (2012) Cooperative function of PLDδ and PLDα1 in abscisic acid-induced stomatal closure in Arabidopsis. Plant Physiol. 159 450-60 PubMed GONUTS page
↑ Katagiri, T et al. (2001) Involvement of a novel Arabidopsis phospholipase D, AtPLDdelta, in dehydration-inducible accumulation of phosphatidic acid in stress signalling. Plant J. 26 595-605 PubMed GONUTS page
↑ Mitra, SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J. Proteome Res. 6 1933-50 PubMed GONUTS page
↑ ^6.0 ^6.1 Zhang, W et al. (2003) The oleate-stimulated phospholipase D, PLDdelta, and phosphatidic acid decrease H2O2-induced cell death in Arabidopsis. Plant Cell 15 2285-95 PubMed GONUTS page
↑ Fernandez-Calvino, L et al. (2011) Arabidopsis plasmodesmal proteome. PLoS ONE 6 e18880 PubMed GONUTS page
↑ Li, W et al. (2004) The plasma membrane-bound phospholipase Ddelta enhances freezing tolerance in Arabidopsis thaliana. Nat. Biotechnol. 22 427-33 PubMed GONUTS page
↑ Kawamura, Y & Uemura, M (2003) Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. Plant J. 36 141-54 PubMed GONUTS page
↑ Nikolovski, N et al. (2012) Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol. 160 1037-51 PubMed GONUTS page
↑ Marmagne, A et al. (2007) A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Mol. Cell Proteomics 6 1980-96 PubMed GONUTS page
↑ Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page
↑ Dunkley, TP et al. (2006) Mapping the Arabidopsis organelle proteome. Proc. Natl. Acad. Sci. U.S.A. 103 6518-23 PubMed GONUTS page
↑ Carter, C et al. (2004) The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Plant Cell 16 3285-303 PubMed GONUTS page
↑ Qin, C et al. (2002) Kinetic analysis of Arabidopsis phospholipase Ddelta. Substrate preference and mechanism of activation by Ca2+ and phosphatidylinositol 4,5-biphosphate. J. Biol. Chem. 277 49685-90 PubMed GONUTS page

[PMID:11706190-1] 1.0 ^1.1 Wang, C & Wang, X (2001) A novel phospholipase D of Arabidopsis that is activated by oleic acid and associated with the plasma membrane. Plant Physiol. 127 1102-12 PubMed GONUTS page

[PMID:22932846-2] Distéfano, AM et al. (2012) Phospholipase Dδ is involved in nitric oxide-induced stomatal closure. Planta 236 1899-907 PubMed GONUTS page

[PMID:22392280-3] 3.0 ^3.1 Uraji, M et al. (2012) Cooperative function of PLDδ and PLDα1 in abscisic acid-induced stomatal closure in Arabidopsis. Plant Physiol. 159 450-60 PubMed GONUTS page

[PMID:11489173-4] Katagiri, T et al. (2001) Involvement of a novel Arabidopsis phospholipase D, AtPLDdelta, in dehydration-inducible accumulation of phosphatidic acid in stress signalling. Plant J. 26 595-605 PubMed GONUTS page

[PMID:17432890-5] Mitra, SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J. Proteome Res. 6 1933-50 PubMed GONUTS page

[PMID:14508007-6] 6.0 ^6.1 Zhang, W et al. (2003) The oleate-stimulated phospholipase D, PLDdelta, and phosphatidic acid decrease H2O2-induced cell death in Arabidopsis. Plant Cell 15 2285-95 PubMed GONUTS page

[PMID:21533090-7] Fernandez-Calvino, L et al. (2011) Arabidopsis plasmodesmal proteome. PLoS ONE 6 e18880 PubMed GONUTS page

[PMID:15004566-8] Li, W et al. (2004) The plasma membrane-bound phospholipase Ddelta enhances freezing tolerance in Arabidopsis thaliana. Nat. Biotechnol. 22 427-33 PubMed GONUTS page

[PMID:14535880-9] Kawamura, Y & Uemura, M (2003) Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. Plant J. 36 141-54 PubMed GONUTS page

[PMID:22923678-10] Nikolovski, N et al. (2012) Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol. 160 1037-51 PubMed GONUTS page

[PMID:17644812-11] Marmagne, A et al. (2007) A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Mol. Cell Proteomics 6 1980-96 PubMed GONUTS page

[PMID:17317660-12] Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page

[PMID:16618929-13] Dunkley, TP et al. (2006) Mapping the Arabidopsis organelle proteome. Proc. Natl. Acad. Sci. U.S.A. 103 6518-23 PubMed GONUTS page

[PMID:15539469-14] Carter, C et al. (2004) The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Plant Cell 16 3285-303 PubMed GONUTS page

[PMID:12397060-15] Qin, C et al. (2002) Kinetic analysis of Arabidopsis phospholipase Ddelta. Substrate preference and mechanism of activation by Ca2+ and phosphatidylinositol 4,5-biphosphate. J. Biol. Chem. 277 49685-90 PubMed GONUTS page

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ARATH:PLDD1

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