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ARATH:DOF42

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Species (Taxon ID) Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s) DOF4.2
Protein Name(s) Dof zinc finger protein DOF4.2

AtDOF4.2

External Links
UniProt Q9SUB1
EMBL AL080282
AL161554
CP002687
AB493687
PIR T10645
RefSeq NP_193835.1
UniGene At.54449
EnsemblPlants AT4G21030.1
GeneID 827850
KEGG ath:AT4G21030
GeneFarm 4467
TAIR AT4G21030
eggNOG NOG254967
HOGENOM HOG000097076
InParanoid Q9SUB1
OMA QPRYKCK
PhylomeDB Q9SUB1
Proteomes UP000006548
Genevestigator Q9SUB1
GO GO:0005634
GO:0046872
GO:0043565
GO:0003700
GO:0048825
GO:0048359
GO:0045893
GO:2000032
GO:0006355
GO:0010214
GO:0006351
InterPro IPR003851
Pfam PF02701
ProDom PD007478
PROSITE PS01361
PS50884

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:2000032

regulation of secondary shoot formation

PMID:23095045[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048825

cotyledon development

PMID:23095045[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048359

mucilage metabolic process involved in seed coat development

PMID:23095045[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:23095045[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:23095045[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0010214

seed coat development

PMID:23095045[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:23095045[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:12475498[2]

ECO:0000250

sequence similarity evidence used in manual assertion

F

Seeded From UniProt

Missing: with/from

enables

GO:0003700

DNA-binding transcription factor activity

PMID:11118137[3]

ECO:0000250

sequence similarity evidence used in manual assertion

F

Seeded From UniProt

Missing: with/from

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003851

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003851

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:11118137[3]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Zou, HF et al. (2013) The transcription factor AtDOF4.2 regulates shoot branching and seed coat formation in Arabidopsis. Biochem. J. 449 373-88 PubMed GONUTS page
  2. ↑ Yanagisawa, S (2002) The Dof family of plant transcription factors. Trends Plant Sci. 7 555-60 PubMed GONUTS page
  3. ↑ 3.0 3.1 Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page