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ARATH:CSP3
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | CSP3 | |
| Protein Name(s) | Cold shock domain-containing protein 3
AtCSP3 | |
| External Links | ||
| UniProt | Q94C69 | |
| EMBL | AB308041 CP002685 AY035133 AY062985 | |
| PIR | T00837 | |
| RefSeq | NP_565427.1 | |
| UniGene | At.19464 | |
| ProteinModelPortal | Q94C69 | |
| SMR | Q94C69 | |
| STRING | 3702.AT2G17870.1-P | |
| PaxDb | Q94C69 | |
| PRIDE | Q94C69 | |
| EnsemblPlants | AT2G17870.1 | |
| GeneID | 816297 | |
| KEGG | ath:AT2G17870 | |
| TAIR | AT2G17870 | |
| eggNOG | COG1278 | |
| HOGENOM | HOG000186262 | |
| InParanoid | Q94C69 | |
| KO | K09250 | |
| OMA | MEDQSAA | |
| PhylomeDB | Q94C69 | |
| Reactome | REACT_180054 | |
| Proteomes | UP000006548 | |
| Genevestigator | Q94C69 | |
| GO | GO:0005737 GO:0005634 GO:0003677 GO:0003723 GO:0008270 GO:0009631 GO:0032508 GO:0006355 GO:0009409 | |
| Gene3D | 2.40.50.140 4.10.60.10 | |
| InterPro | IPR019844 IPR011129 IPR002059 IPR012340 IPR001878 | |
| Pfam | PF00313 PF00098 | |
| PRINTS | PR00050 | |
| SMART | SM00357 SM00343 | |
| SUPFAM | SSF50249 SSF57756 | |
| PROSITE | PS00352 PS50158 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009826 |
unidimensional cell growth |
ECO:0000315 |
P |
Figure 4H shows that mutants have significantly shorter cells in the leaf-length axis. |
complete | |||||
|
involved_in |
GO:0009826 |
unidimensional cell growth |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009631 |
cold acclimation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009409 |
response to cold |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009409 |
response to cold |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001878 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Yang, Y & Karlson, D (2012) Effects of mutations in the Arabidopsis Cold Shock Domain Protein 3 (AtCSP3) gene on leaf cell expansion. J. Exp. Bot. 63 4861-73 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 Kim, MH et al. (2009) Cold shock domain protein 3 regulates freezing tolerance in Arabidopsis thaliana. J. Biol. Chem. 284 23454-60 PubMed GONUTS page
- ↑ Karlson, D & Imai, R (2003) Conservation of the cold shock domain protein family in plants. Plant Physiol. 131 12-5 PubMed GONUTS page
- ↑ Reichel, M et al. (2016) In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Plant Cell 28 2435-2452 PubMed GONUTS page
