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ARATH:CHLM
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | CHLM | |
| Protein Name(s) | Magnesium protoporphyrin IX methyltransferase, chloroplastic | |
| External Links | ||
| UniProt | Q9SW18 | |
| EMBL | AL035523 AL161562 CP002687 CP002687 CP002687 CP002687 CP002687 AY034948 AY062991 AK316688 AK316669 AK319071 | |
| PIR | T05529 | |
| RefSeq | NP_001119052.1 NP_001190832.1 NP_194238.1 NP_849438.1 NP_849439.1 | |
| UniGene | At.22023 | |
| ProteinModelPortal | Q9SW18 | |
| SMR | Q9SW18 | |
| STRING | 3702.AT4G25080.1-P | |
| PRIDE | Q9SW18 | |
| EnsemblPlants | AT4G25080.1 AT4G25080.2 AT4G25080.3 AT4G25080.5 | |
| GeneID | 828611 | |
| KEGG | ath:AT4G25080 | |
| TAIR | AT4G25080 | |
| eggNOG | COG2227 | |
| HOGENOM | HOG000154343 | |
| InParanoid | Q9SW18 | |
| KO | K03428 | |
| OMA | LDVFIHY | |
| PhylomeDB | Q9SW18 | |
| BioCyc | ARA:AT4G25080-MONOMER ARA:GQT-425-MONOMER ARA:GQT-426-MONOMER ARA:GQT-427-MONOMER ARA:GQT-428-MONOMER MetaCyc:AT4G25080-MONOMER | |
| UniPathway | UPA00668 | |
| Proteomes | UP000006548 | |
| Genevestigator | Q9SW18 | |
| GO | GO:0009507 GO:0009941 GO:0031969 GO:0009534 GO:0009535 GO:0046406 GO:0015995 | |
| Gene3D | 3.40.50.150 | |
| InterPro | IPR010251 IPR010940 IPR029063 | |
| Pfam | PF07109 | |
| SUPFAM | SSF53335 | |
| TIGRFAMs | TIGR02021 | |
| PROSITE | PS51556 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0015995 |
chlorophyll biosynthetic process |
ECO:0000315 |
P |
In figure 2(a-b) CHLM (wt) showed higher absorbances at approximately 450nm and 650nm with a higher florescence at 630 nm, demonstrating chlorophyll was present in the wildtype and not in the mutant. In c, magnesium protoporphyrin IX methyltransferase is needed to add a methyl onto magnesium protoporphyrin IX (reactant) since a build up of this reactant was seen in the mutant. |
complete | |||||
| GO:0046406 |
magnesium protoporphyrin IX methyltransferase activity |
ECO:0000315 |
F |
In figure 2C, methyl transferase activity was observed as florescence of Mg protoporphyrin IX methyl ester was observed in the wildtype CHLM but not in the mutant chlm. The presence of chlorophyll was also observed in the wildtype CHLM,represented by CHLM fluorescences at 630nm, but not in the mutant chlm,figure 2B. |
complete | |||||
|
involved_in |
GO:0015995 |
chlorophyll biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046406 |
magnesium protoporphyrin IX methyltransferase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046406 |
magnesium protoporphyrin IX methyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015995 |
chlorophyll biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009941 |
chloroplast envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009941 |
chloroplast envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009534 |
chloroplast thylakoid |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015995 |
chlorophyll biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046406 |
magnesium protoporphyrin IX methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046406 |
magnesium protoporphyrin IX methyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009579 |
thylakoid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009536 |
plastid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015995 |
chlorophyll biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0149 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032259 |
methylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009535 |
chloroplast thylakoid membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031969 |
chloroplast membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Pontier, D et al. (2007) Knock-out of the magnesium protoporphyrin IX methyltransferase gene in Arabidopsis. Effects on chloroplast development and on chloroplast-to-nucleus signaling. J. Biol. Chem. 282 2297-304 PubMed GONUTS page
- ↑ Block, MA et al. (2002) The plant S-adenosyl-L-methionine:Mg-protoporphyrin IX methyltransferase is located in both envelope and thylakoid chloroplast membranes. Eur. J. Biochem. 269 240-8 PubMed GONUTS page
- ↑ 3.0 3.1 Ferro, M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol. Cell Proteomics 9 1063-84 PubMed GONUTS page
- ↑ Froehlich, JE et al. () Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J. Proteome Res. 2 413-25 PubMed GONUTS page
- ↑ Zybailov, B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS ONE 3 e1994 PubMed GONUTS page
- ↑ Kleffmann, T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr. Biol. 14 354-62 PubMed GONUTS page
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