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ARATH:BPC6
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | BPC6 (synonyms: BBR/BPC6) | |
| Protein Name(s) | Protein BASIC PENTACYSTEINE6
AtBPC6 GAGA-binding transcriptional activator BBR/BPC6 | |
| External Links | ||
| UniProt | Q8L999 | |
| EMBL | EF123107 EF123108 AY380572 AB016888 CP002688 CP002688 BT024874 AK221752 AK227246 AY088564 | |
| RefSeq | NP_001078690.1 NP_568605.1 | |
| UniGene | At.19893 At.30165 | |
| BioGrid | 19509 | |
| STRING | 3702.AT5G42520.1-P | |
| PRIDE | Q8L999 | |
| EnsemblPlants | AT5G42520.1 | |
| GeneID | 834259 | |
| KEGG | ath:AT5G42520 | |
| TAIR | AT5G42520 | |
| HOGENOM | HOG000241671 | |
| InParanoid | Q8L999 | |
| OMA | NPREMHM | |
| PhylomeDB | Q8L999 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q8L999 | |
| Genevestigator | Q8L999 | |
| GO | GO:0005730 GO:0005634 GO:0003677 GO:0042803 GO:0003700 GO:0006355 GO:0009723 GO:0006351 | |
| InterPro | IPR010409 | |
| PANTHER | PTHR31421 | |
| Pfam | PF06217 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009723 |
response to ethylene |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
AGI_LocusCode:AT1G14685 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002048723 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009723 |
response to ethylene |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002048725 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002048723 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002048723 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0003700 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005730 |
nucleolus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Wanke, D et al. (2011) Alanine zipper-like coiled-coil domains are necessary for homotypic dimerization of plant GAGA-factors in the nucleus and nucleolus. PLoS ONE 6 e16070 PubMed GONUTS page
- ↑ Monfared, MM et al. (2011) Overlapping and antagonistic activities of BASIC PENTACYSTEINE genes affect a range of developmental processes in Arabidopsis. Plant J. 66 1020-31 PubMed GONUTS page
- ↑ Meister, RJ et al. (2004) Definition and interactions of a positive regulatory element of the Arabidopsis INNER NO OUTER promoter. Plant J. 37 426-38 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
