ARATH:A8MRI1

Species (Taxon ID)	Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s)	ATU2AF35A (ECO:0000313 with EMBL:AEE30859.1)
Protein Name(s)	U2 snRNP auxiliary factor small subunit (ECO:0000313 with EMBL:AEE30859.1)
External Links
UniProt	A8MRI1
EMBL	CP002684
RefSeq	NP_001077609.1
UniGene	At.20200 At.63995 At.67851
ProteinModelPortal	A8MRI1
SMR	A8MRI1
STRING	3702.AT1G27650.1
PaxDb	A8MRI1
EnsemblPlants	AT1G27650.2
GeneID	839657
Gramene	AT1G27650.2
Araport	AT1G27650
eggNOG	KOG2202 ENOG410Z5PX
HOGENOM	HOG000178619
Proteomes	UP000006548
ExpressionAtlas	A8MRI1
GO	GO:0089701 GO:0046872 GO:0000166 GO:0003723 GO:0000398
Gene3D	3.30.70.330
InterPro	IPR012677 IPR000504 IPR003954 IPR009145 IPR000571
PANTHER	PTHR12620
Pfam	PF00076 PF00642
PRINTS	PR01848
SMART	SM00361 SM00356
SUPFAM	SSF54928
PROSITE	PS50102 PS50103

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0005654	nucleoplasm	PMID:28432478	ECO:0000314			C		Protein called AtU2AF35 in A. thaliana. "As shown in Fig. 2, strong nucleoplasm GFP fluorescence was found except the dark circled area which is presumably nucleolus. We performed FRAP analysis of two areas (nucleoplasm and nucleolus). In the nucleolus area, photobleaching was done to expand the dark circled area. Fluorescence recovered rapidly after photobleaching in both areas, indicating that Arabidopsis U2AF and SF1 proteins are highly mobile nuclear proteins, like the RSZp22 protein."	complete CACAO 12818
	GO:0005730	nucleolus	PMID:28432478	ECO:0000314			C		Protein called AtU2AF35 in A. thaliana. "As shown in Fig. 2, strong nucleoplasm GFP fluorescence was found except the dark circled area which is presumably nucleolus. We performed FRAP analysis of two areas (nucleoplasm and nucleolus). In the nucleolus area, photobleaching was done to expand the dark circled area. Fluorescence recovered rapidly after photobleaching in both areas, indicating that Arabidopsis U2AF and SF1 proteins are highly mobile nuclear proteins, like the RSZp22 protein."	complete CACAO 12819
	GO:0006913	nucleocytoplasmic transport	PMID:28432478	ECO:0000314			P		Protein called AtU2AF35 in A. thaliana. "As shown in Fig. 5, the GFP fluorescence of all these proteins in nuclei was strongly reduced during the course of cytoplasmic photobleaching. … These results demonstrate that AtU2AF35, AtU2AF65, and AtSF1 are nucleocytoplasmic shuttling proteins"	complete CACAO 12831
involved_in	GO:0000398	mRNA splicing, via spliceosome	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR009145	P		Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000504 InterPro:IPR003954 InterPro:IPR035979	F		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR009145	F		Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000571	F		Seeded From UniProt	complete
part_of	GO:0089701	U2AF	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR009145	C		Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0694	F		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000414619	F		Seeded From UniProt	complete
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References

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