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AGRT5:Q7CX59
Contents
Species (Taxon ID) | Agrobacterium tumefaciens (strain C58 / ATCC 33970). (176299) | |
Gene Name(s) | sinR (ECO:0000313 with EMBL:AAK88131.2) | |
Protein Name(s) | Regulator of Biofilm formation, Fnr Family (ECO:0000313 with EMBL:AAK88131.2) | |
External Links | ||
UniProt | Q7CX59 | |
EMBL | AE007869 | |
RefSeq | NP_355346.2 | |
ProteinModelPortal | Q7CX59 | |
STRING | 176299.Atu2394 | |
EnsemblBacteria | AAK88131 | |
GeneID | 1134432 | |
KEGG | atu:Atu2394 | |
PATRIC | 20814569 | |
eggNOG | COG0664 | |
HOGENOM | HOG000295659 | |
OMA | HTLMRDI | |
OrthoDB | EOG60KN40 | |
BioCyc | AGRO:ATU2394-MONOMER | |
Proteomes | UP000000813 | |
GO | GO:0003677 GO:0006355 GO:0006351 | |
Gene3D | 1.10.10.10 2.60.120.10 | |
InterPro | IPR018490 IPR000595 IPR012318 IPR014710 IPR011991 | |
Pfam | PF00027 | |
SMART | SM00100 | |
SUPFAM | SSF51206 | |
PROSITE | PS50042 PS51063 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
GO:0006355 |
regulation of transcription, DNA-dependent |
ECO:0000314 |
P |
Figure 7 in this paper expresses the effects of protein sinR when known binding site FNR's conditions are altered. This infers that this gene has to do with DNA binding and transcription factors. |
complete | |||||
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Ramey, BE et al. (2004) The FNR-type transcriptional regulator SinR controls maturation of Agrobacterium tumefaciens biofilms. Mol. Microbiol. 52 1495-511 PubMed GONUTS page