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9CAUD:A0A0K2D0M5
Contents
| Species (Taxon ID) | Bacillus phage TsarBomba. (1690456) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | RNA polymerase sigma factor (ECO:0000313 with EMBL:ALA13222.1) | |
| External Links | ||
| UniProt | A0A0K2D0M5 | |
| EMBL | KT224359 | |
| RefSeq | YP_009207004.1 | |
| GeneID | 26633452 | |
| GO | GO:0003677 GO:0016987 GO:0003700 GO:0006352 | |
| Gene3D | 1.10.10.10 | |
| InterPro | IPR014284 IPR000943 IPR007627 IPR007630 IPR013325 IPR013324 IPR011991 | |
| Pfam | PF04542 PF04545 | |
| PRINTS | PR00046 | |
| SUPFAM | SSF88659 SSF88946 | |
| TIGRFAMs | TIGR02937 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0016987 |
sigma factor activity |
ECO:0000250 |
UniProtKB: |
F |
Transfer annotation from page ECOLI:CRL. BlastP results show the e value of 3e -42 and query cover of 99% with E. Coli |
complete | ||||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000943 |
F |
Seeded From UniProt |
complete | ||
| GO:0003677 |
DNA binding |
ECO:0000314 |
F |
Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase |
complete | |||||
|
involved_in |
GO:0006352 |
DNA-templated transcription, initiation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000943 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000943 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Gribskov, M & Burgess, RR (1986) Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins. Nucleic Acids Res. 14 6745-63 PubMed GONUTS page
