YERPE:LCRF

Species (Taxon ID)	Yersinia pestis. (632)
Gene Name(s)	lcrF (synonyms: virF)
Protein Name(s)	Thermoregulatory protein LcrF
External Links
UniProt	P28808
EMBL	M86690 AF074612 AF053946 AL117189 AE017043
PIR	A42884
RefSeq	NP_395183.1 NP_857733.1 NP_857928.1 NP_995362.1
ProteinModelPortal	P28808
IntAct	P28808
STRING	214092.YPCD1.49
PRIDE	P28808
DNASU	1149292
EnsemblBacteria	AAS58553
GeneID	1149292 1172694 15151867 2767558
KEGG	ype:YPCD1.49 ypm:YP_pCD34
PATRIC	18588626
eggNOG	COG2207
HOGENOM	HOG000247159
OMA	MTFVAYR
OrthoDB	EOG6SZ1FM
BioCyc	YPES214092:GKDD-4256-MONOMER
Proteomes	UP000000815 UP000001019
GO	GO:0043565 GO:0003700 GO:0009405 GO:0006351
Gene3D	1.10.10.60 2.60.120.10
InterPro	IPR003313 IPR009057 IPR018060 IPR018062 IPR014710 IPR020449
Pfam	PF02311 PF00165
PRINTS	PR00032
SMART	SM00342
SUPFAM	SSF46689 SSF51215
PROSITE	PS00041 PS01124

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0006355	regulation of transcription, DNA-templated	PMID:24658611	ECO:0000315			P		According to figure 2a, activity of nine Ca2+ depletion induced promoters were decreased in cells with a mutant lcrf genotype as opposed to cells with a wildtype lcrf genotype. Thus, Ca2+ depletion induced genes are regulated by LcrF.	complete CACAO 9843
involved_in	GO:0006355	regulation of transcription, DNA-templated	PMID:24658611	ECO:0000315	mutant phenotype evidence used in manual assertion		P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR009057	F		Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR018060 InterPro:IPR018062 InterPro:IPR020449	F		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR003313 InterPro:IPR018060 InterPro:IPR018062 InterPro:IPR020449	P		Seeded From UniProt	complete
enables	GO:0043565	sequence-specific DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR018060 InterPro:IPR018062	F		Seeded From UniProt	complete
involved_in	GO:0009405	pathogenesis	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0843	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
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References

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