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YEAST:SED5

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Species (Taxon ID) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292)
Gene Name(s) SED5
Protein Name(s) Integral membrane protein SED5
External Links
UniProt Q01590
EMBL X66980
Z73198
BK006945
PIR A44019
RefSeq NP_013126.1
PDB 1MQS
1PD0
PDBsum 1MQS
1PD0
ProteinModelPortal Q01590
SMR Q01590
BioGrid 31300
DIP DIP-2489N
IntAct Q01590
MINT MINT-563409
STRING 4932.YLR026C
MaxQB Q01590
PaxDb Q01590
EnsemblFungi [example_ID YLR026C]
GeneID 850713
KEGG sce:YLR026C
CYGD YLR026c
SGD S000004016
eggNOG NOG326964
GeneTree ENSGT00390000000652
HOGENOM HOG000194860
InParanoid Q01590
KO K08490
OMA KSSVLMQ
OrthoDB EOG7G1VHK
BioCyc YEAST:G3O-32187-MONOMER
EvolutionaryTrace Q01590
NextBio 966775
PRO PR:Q01590
Proteomes UP000002311
Genevestigator Q01590
GO GO:0005801
GO:0000139
GO:0016021
GO:0031201
GO:0005484
GO:0006888
GO:0006891
GO:0006886
GO:0006906
GO:0048280
InterPro IPR021538
IPR006012
IPR006011
IPR010989
IPR000727
Pfam PF11416
PF05739
PF00804
SMART SM00397
SUPFAM SSF47661
PROSITE PS00914
PS50192

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0006888

ER to Golgi vesicle-mediated transport

PMID:1400588[1]

ECO:0000314

P

Figure 8

complete
CACAO 10482

involved_in

GO:0006888

endoplasmic reticulum to Golgi vesicle-mediated transport

PMID:1400588[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048280

vesicle fusion with Golgi apparatus

PMID:9545229[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0031201

SNARE complex

PMID:11001058[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0031201

SNARE complex

PMID:11959998[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

PMID:1400588[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006906

vesicle fusion

PMID:11001046[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006891

intra-Golgi vesicle-mediated transport

PMID:7596416[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006888

endoplasmic reticulum to Golgi vesicle-mediated transport

PMID:9545229[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005801

cis-Golgi network

PMID:9725919[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005484

SNAP receptor activity

PMID:11001058[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0005484

SNAP receptor activity

PMID:11959998[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0048278

vesicle docking

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000461349
SGD:S000005632

P

Seeded From UniProt

complete

part_of

GO:0031201

SNARE complex

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013343
FB:FBgn0035540
MGI:MGI:103077
MGI:MGI:893577
PANTHER:PTN000461349
RGD:61917
RGD:619747
RGD:621005
RGD:621019
RGD:68426
SGD:S000002876
SGD:S000003180
SGD:S000004016
SGD:S000005378
SGD:S000005632
SGD:S000006153
UniProtKB:O14662
UniProtKB:O43752
UniProtKB:P56962
UniProtKB:Q12846
UniProtKB:Q16623
UniProtKB:Q86Y82
dictyBase:DDB_G0275429

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0031106
PANTHER:PTN000461349
RGD:61915
SGD:S000004016

C

Seeded From UniProt

complete

part_of

GO:0012505

endomembrane system

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000461349
TAIR:locus:2025620

C

Seeded From UniProt

complete

involved_in

GO:0006906

vesicle fusion

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013343
MGI:MGI:103077
PANTHER:PTN000461349
RGD:61917
RGD:619747
SGD:S000002876
SGD:S000003180
SGD:S000004016
SGD:S000005378
SGD:S000005632
SGD:S000006153
UniProtKB:O43752
dictyBase:DDB_G0275429
dictyBase:DDB_G0287733

P

Seeded From UniProt

complete

involved_in

GO:0006888

endoplasmic reticulum to Golgi vesicle-mediated transport

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000461791
RGD:68426
SGD:S000004016

P

Seeded From UniProt

complete

involved_in

GO:0006886

intracellular protein transport

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000461349
UniProtKB:Q946Y7

P

Seeded From UniProt

complete

enables

GO:0005484

SNAP receptor activity

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0011708
FB:FBgn0013343
FB:FBgn0031106
FB:FBgn0035540
PANTHER:PTN000461349
RGD:619747
RGD:621005
RGD:621019
SGD:S000000012
SGD:S000002876
SGD:S000003180
SGD:S000004016
SGD:S000004795
SGD:S000005378
SGD:S000005562
SGD:S000005632
SGD:S000006153
TAIR:locus:2148960
UniProtKB:O14662
UniProtKB:P56962
UniProtKB:Q13190

F

Seeded From UniProt

complete

enables

GO:0000149

SNARE binding

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013343
FB:FBgn0035540
MGI:MGI:109355
MGI:MGI:893577
PANTHER:PTN000461349
RGD:2558
RGD:619747
RGD:621019
RGD:69430
RGD:708499
UniProtKB:O15400
UniProtKB:P56962

F

Seeded From UniProt

complete

part_of

GO:0000139

Golgi membrane

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000461791
RGD:68426

C

Seeded From UniProt

complete

enables

GO:0005484

SNAP receptor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006012

F

Seeded From UniProt

complete

involved_in

GO:0006886

intracellular protein transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006012

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006012
InterPro:IPR010989

C

Seeded From UniProt

complete

involved_in

GO:0016192

vesicle-mediated transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010989

P

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0333

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

involved_in

GO:0015031

protein transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0653

P

Seeded From UniProt

complete

part_of

GO:0000139

Golgi membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0134

C

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 1.2 Hardwick, KG & Pelham, HR (1992) SED5 encodes a 39-kD integral membrane protein required for vesicular transport between the ER and the Golgi complex. J. Cell Biol. 119 513-21 PubMed GONUTS page
  2. ↑ 2.0 2.1 Cao, X et al. (1998) Initial docking of ER-derived vesicles requires Uso1p and Ypt1p but is independent of SNARE proteins. EMBO J. 17 2156-65 PubMed GONUTS page
  3. ↑ 3.0 3.1 Parlati, F et al. (2000) Topological restriction of SNARE-dependent membrane fusion. Nature 407 194-8 PubMed GONUTS page
  4. ↑ 4.0 4.1 Parlati, F et al. (2002) Distinct SNARE complexes mediating membrane fusion in Golgi transport based on combinatorial specificity. Proc. Natl. Acad. Sci. U.S.A. 99 5424-9 PubMed GONUTS page
  5. ↑ McNew, JA et al. (2000) Compartmental specificity of cellular membrane fusion encoded in SNARE proteins. Nature 407 153-9 PubMed GONUTS page
  6. ↑ Banfield, DK et al. (1995) A SNARE-like protein required for traffic through the Golgi complex. Nature 375 806-9 PubMed GONUTS page
  7. ↑ Wooding, S & Pelham, HR (1998) The dynamics of golgi protein traffic visualized in living yeast cells. Mol. Biol. Cell 9 2667-80 PubMed GONUTS page
  8. ↑ 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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