GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
XENTR:F6RBJ7
Contents
Species (Taxon ID) | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). (8364) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Histidine ammonia-lyase (ECO:0000256 with RuleBase:RU004479) | |
External Links | ||
UniProt | F6RBJ7 | |
EMBL | AAMC01112845 | |
RefSeq | NP_001006832.2 NP_001265457.1 | |
UniGene | Str.68836 | |
Ensembl | ENSXETT00000046785 | |
GeneID | 448568 | |
KEGG | xtr:448568 | |
CTD | 100125662 | |
Xenbase | XB-GENE-1009089 | |
GeneTree | ENSGT00390000009047 | |
InParanoid | F6RBJ7 | |
KO | K01745 | |
OMA | LGTEAIC | |
OrthoDB | EOG73RB9V | |
TreeFam | TF313824 | |
Reactome | REACT_252433 | |
Proteomes | UP000008143 | |
Bgee | F6RBJ7 | |
ExpressionAtlas | F6RBJ7 | |
GO | GO:0005737 GO:0004397 GO:0009058 GO:0019556 GO:0019557 | |
Gene3D | 1.10.275.10 | |
InterPro | IPR001106 IPR024083 IPR005921 IPR008948 IPR022313 | |
Pfam | PF00221 | |
SUPFAM | SSF48557 | |
TIGRFAMs | TIGR01225 | |
PROSITE | PS00488 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0006548 |
histidine catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:96010 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004397 |
histidine ammonia-lyase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:96010 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004397 |
histidine ammonia-lyase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006548 |
histidine catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016841 |
ammonia-lyase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004397 |
histidine ammonia-lyase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006547 |
histidine metabolic process |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016829 |
lyase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0019556 |
histidine catabolic process to glutamate and formamide |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00379 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019557 |
histidine catabolic process to glutamate and formate |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00379 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page