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XENLA:ELAV2

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Species (Taxon ID) Xenopus laevis (African clawed frog). (8355)
Gene Name(s) elavl2
Protein Name(s) ELAV-like protein 2

Elav like-1 (ECO:0000303 with PMID:7547471[1]) Xel-1 (ECO:0000312 with EMBL:CAA59430.1) Protein ElrB (ECO:0000303 with PMID:7753842[2]) p45 (ECO:0000303 with PMID:11780632[3])

External Links
UniProt Q91903
EMBL X85111
U17597
BC170539
BC094189
PIR I51676
RefSeq NP_001081035.1
NP_001081613.1
UniGene Xl.1648
Xl.34955
ProteinModelPortal Q91903
SMR Q91903
BioGrid 98944
IntAct Q91903
MINT MINT-2880431
GeneID 394342
397952
KEGG xla:394342
xla:397952
CTD 394342
397952
Xenbase XB-GENE-6254447
XB-GENE-866091
HOVERGEN HBG002295
KO K13208
GO GO:0005938
GO:0005737
GO:0030529
GO:0003730
GO:0000166
GO:0017131
GO:0008298
GO:0000122
GO:0045892
GO:0007399
GO:0051260
Gene3D 3.30.70.330
InterPro IPR006548
IPR002343
IPR012677
IPR000504
Pfam PF00076
PRINTS PR00961
SMART SM00360
TIGRFAMs TIGR01661
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0051260

protein homooligomerization

PMID:16930598[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:16199879[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:17942399[6]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P54824

C

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:19458392[7]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q6JPI2

C

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:19458392[7]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:O73932

C

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:19458392[7]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P54824

C

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:19458392[7]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q68FI1

C

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:19458392[7]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q498K9

C

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:16199879[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0017131

uridine-rich cytoplasmic polyadenylylation element binding

PMID:16930598[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0008298

intracellular mRNA localization

PMID:19458392[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

PMID:10470646[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005938

cell cortex

PMID:19458392[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:16199879[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:19458392[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:9174163[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

PMID:11780632[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

PMID:16199879[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

PMID:16930598[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

PMID:19458392[7]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:16199879[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR035979

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002343
InterPro:IPR006548

F

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005938

cell cortex

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0138

C

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ Perron, M et al. (1995) Isolation and embryonic expression of Xel-1, a nervous system-specific Xenopus gene related to the elav gene family. Mech. Dev. 51 235-49 PubMed GONUTS page
  2. ↑ Good, PJ (1995) A conserved family of elav-like genes in vertebrates. Proc. Natl. Acad. Sci. U.S.A. 92 4557-61 PubMed GONUTS page
  3. ↑ 3.0 3.1 Otero, LJ et al. (2001) A 250-nucleotide UA-rich element in the 3' untranslated region of Xenopus laevis Vg1 mRNA represses translation both in vivo and in vitro. RNA 7 1753-67 PubMed GONUTS page
  4. ↑ 4.0 4.1 4.2 Devaux, A et al. (2006) Xenopus ElrB, but not ElrA, binds RNA as an oligomer: possible role of the linker. FEBS Lett. 580 4947-52 PubMed GONUTS page
  5. ↑ 5.0 5.1 5.2 5.3 5.4 Colegrove-Otero, LJ et al. (2005) The Xenopus ELAV protein ElrB represses Vg1 mRNA translation during oogenesis. Mol. Cell. Biol. 25 9028-39 PubMed GONUTS page
  6. ↑ Minshall, N et al. (2007) CPEB interacts with an ovary-specific eIF4E and 4E-T in early Xenopus oocytes. J. Biol. Chem. 282 37389-401 PubMed GONUTS page
  7. ↑ 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 Arthur, PK et al. (2009) Participation of Xenopus Elr-type proteins in vegetal mRNA localization during oogenesis. J. Biol. Chem. 284 19982-92 PubMed GONUTS page
  8. ↑ Perron, M et al. (1999) Misexpression of the RNA-binding protein ELRB in Xenopus presumptive neurectoderm induces proliferation arrest and programmed cell death. Int. J. Dev. Biol. 43 295-303 PubMed GONUTS page
  9. ↑ Perron, M et al. (1997) Subcellular distribution of Xenopus XEL-1 protein, a member of the neuron-specific ELAV/Hu family, revealed by epitope tagging. DNA Cell Biol. 16 579-87 PubMed GONUTS page
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