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VIBFI:CPDP
Contents
| Species (Taxon ID) | Vibrio fischeri. (668) | |
| Gene Name(s) | cpdP | |
| Protein Name(s) | 3',5'-cyclic-nucleotide phosphodiesterase
3':5'-CNP PDEase | |
| External Links | ||
| UniProt | Q56686 | |
| EMBL | L11527 | |
| PIR | A40602 | |
| ProteinModelPortal | Q56686 | |
| GO | GO:0042597 GO:0004115 GO:0006198 | |
| Gene3D | 3.60.15.10 | |
| InterPro | IPR001279 IPR024225 IPR000396 | |
| Pfam | PF02112 | |
| PIRSF | PIRSF000962 | |
| PRINTS | PR00388 | |
| SMART | SM00849 | |
| PROSITE | PS00607 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0042597 |
periplasmic space |
ECO:0000315 |
C |
Table 2 demonstrates the ability of the mutant strain without the cpdP gene to grow on various media. The inability of the mutant strain to grow on cAMP or cGMP demonstrates the function of the cpdP gene in cAMP metabolism. |
complete | |||||
|
enables |
GO:0004115 |
3',5'-cyclic-AMP phosphodiesterase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
NOT |
GO:0047555 |
3',5'-cyclic-GMP phosphodiesterase activity |
ECO:0000315 |
F |
Figure 3 Biofilm formation by binA syp double mutants. Mutants defective for both binA and various syp genes. |
complete | ||||
|
involved_in |
GO:0006198 |
cAMP catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008081 |
phosphoric diester hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004114 |
3',5'-cyclic-nucleotide phosphodiesterase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042597 |
periplasmic space |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Dunlap, PV & Callahan, SM (1993) Characterization of a periplasmic 3':5'-cyclic nucleotide phosphodiesterase gene, cpdP, from the marine symbiotic bacterium Vibrio fischeri. J. Bacteriol. 175 4615-24 PubMed GONUTS page
- ↑ Bassis, CM & Visick, KL (2010) The cyclic-di-GMP phosphodiesterase BinA negatively regulates cellulose-containing biofilms in Vibrio fischeri. J. Bacteriol. 192 1269-78 PubMed GONUTS page
