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VIBF1:Q5E7M6

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Species (Taxon ID) Vibrio fischeri (strain ATCC 700601 / ES114). (312309)
Gene Name(s) ompU (ECO:0000313 with EMBL:AAW84970.1)
Protein Name(s) Outer membrane protein U porin OmpU (ECO:0000313 with EMBL:AAW84970.1)
External Links
UniProt Q5E7M6
EMBL CP000020
RefSeq WP_011261250.1
YP_203858.1
ProteinModelPortal Q5E7M6
STRING 312309.VF_0475
EnsemblBacteria AAW84970
GeneID 3278201
KEGG vfi:VF_0475
PATRIC 20111458
eggNOG COG3203
HOGENOM HOG000272406
KO K08720
OMA YNYLESK
OrthoDB EOG6ZKXNP
BioCyc AFIS312309:GIWP-492-MONOMER
Proteomes UP000000537
GO GO:0044413
Gene3D 2.40.160.10
InterPro IPR023614

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0044413

avoidance of host defenses

PMID:19196278[1]

ECO:0000315

P

Figure 4 shows that mutating the ompU gene increases the amount of V. fischeri bound by host haemocytes, and replacing a functional copy of ompU via a plasmid nullifies the effect of the mutation.

complete
CACAO 5164

involved_in

GO:0044413

avoidance of host defenses

PMID:19196278[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0055085

transmembrane transport

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0015288

P

Seeded From UniProt

complete

involved_in

GO:0055085

transmembrane transport

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0015288

P

Seeded From UniProt

complete

enables

GO:0015288

porin activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033900

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033900

C

Seeded From UniProt

complete

involved_in

GO:0006811

ion transport

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0406

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

enables

GO:0015288

porin activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0626

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0046930

pore complex

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0626

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Nyholm, SV et al. (2009) Recognition between symbiotic Vibrio fischeri and the haemocytes of Euprymna scolopes. Environ. Microbiol. 11 483-93 PubMed GONUTS page