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VIBF1:Q5E6P1
Contents
| Species (Taxon ID) | Vibrio fischeri (strain ATCC 700601 / ES114). (312309) | |
| Gene Name(s) | fur (ECO:0000313 with EMBL:AAW85305.1) | |
| Protein Name(s) | DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport (ECO:0000313 with EMBL:AAW85305.1) | |
| External Links | ||
| UniProt | Q5E6P1 | |
| EMBL | CP000020 | |
| RefSeq | YP_204193.1 | |
| ProteinModelPortal | Q5E6P1 | |
| SMR | Q5E6P1 | |
| STRING | 312309.VF_0810 | |
| EnsemblBacteria | AAW85305 | |
| GeneID | 3277444 | |
| KEGG | vfi:VF_0810 | |
| PATRIC | 20112194 | |
| eggNOG | COG0735 | |
| HOGENOM | HOG000014144 | |
| KO | K03711 | |
| OMA | YGVCTND | |
| OrthoDB | EOG6J48SS | |
| BioCyc | AFIS312309:GIWP-859-MONOMER | |
| Proteomes | UP000000537 | |
| GO | GO:0003677 GO:0003700 | |
| Gene3D | 1.10.10.10 | |
| InterPro | IPR002481 IPR011991 | |
| Pfam | PF01475 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0006355 |
regulation of transcription, DNA-dependent |
ECO:0000315 |
P |
Figure 7a shows the effects of fur on a number of transcriptional factors. |
complete | |||||
| GO:0003677 |
DNA binding |
ECO:0000247 |
|
F |
Figure 6 shows integration points into target genome by fur. |
complete | ||||
|
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0005676 |
ad-hoc quantitative phenotype observation evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000481764 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000481764 |
F |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Heath-Heckman, EA et al. (2013) Bacterial bioluminescence regulates expression of a host cryptochrome gene in the squid-Vibrio symbiosis. MBio 4 PubMed GONUTS page
- ↑ Münch, R et al. (2005) Virtual Footprint and PRODORIC: an integrative framework for regulon prediction in prokaryotes. Bioinformatics 21 4187-9 PubMed GONUTS page
- ↑ Septer, AN et al. (2013) The iron-dependent regulator fur controls pheromone signaling systems and luminescence in the squid symbiont Vibrio fischeri ES114. Appl. Environ. Microbiol. 79 1826-34 PubMed GONUTS page
b
