VIBF1:Q5DZA6

Species (Taxon ID)	Vibrio fischeri (strain ATCC 700601 / ES114). (312309)
Gene Name(s)	rpoE3 (ECO:0000313 with EMBL:AAW87890.1)
Protein Name(s)	RNA polymerase ECF-type sigma factor (ECO:0000313 with EMBL:AAW87890.1)
External Links
UniProt	Q5DZA6
EMBL	CP000021
RefSeq	YP_206778.1
ProteinModelPortal	Q5DZA6
STRING	312309.VF_A0820
EnsemblBacteria	AAW87890
GeneID	3280438
KEGG	vfi:VF_A0820
PATRIC	20117637
eggNOG	COG1595
HOGENOM	HOG000027630
KO	K03088
OMA	CCHIEAD
OrthoDB	EOG6FRCWJ
BioCyc	AFIS312309:GIWP-3575-MONOMER
Proteomes	UP000000537
GO	GO:0003677 GO:0003700 GO:0016987 GO:0006352
Gene3D	1.10.10.10
InterPro	IPR014284 IPR014304 IPR007627 IPR013249 IPR013325 IPR013324 IPR011991
Pfam	PF04542 PF08281
SUPFAM	SSF88659 SSF88946
TIGRFAMs	TIGR02937 TIGR02959

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR013249	F		Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR007627 InterPro:IPR013249 InterPro:IPR013325 InterPro:IPR014284	F		Seeded From UniProt	complete
involved_in	GO:0006352	DNA-templated transcription, initiation	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR007627 InterPro:IPR013249 InterPro:IPR013325 InterPro:IPR014284	P		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR007627 InterPro:IPR013249 InterPro:IPR013325 InterPro:IPR014284	P		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR013249	F		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0731	F		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0731	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
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References

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