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VIBF1:ARCA

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Species (Taxon ID) Vibrio fischeri (strain ATCC 700601 / ES114). (312309)
Gene Name(s) arcA (ECO:0000255 with HAMAP-Rule:MF_00242)
Protein Name(s) Arginine deiminase (ECO:0000255 with HAMAP-Rule:MF_00242)

ADI (ECO:0000255 with HAMAP-Rule:MF_00242) Arginine dihydrolase (ECO:0000255 with HAMAP-Rule:MF_00242) AD (ECO:0000255 with HAMAP-Rule:MF_00242)

External Links
UniProt Q5E7U3
EMBL CP000020
RefSeq YP_203791.1
ProteinModelPortal Q5E7U3
STRING 312309.VF_0408
EnsemblBacteria AAW84903
GeneID 3278145
KEGG vfi:VF_0408
PATRIC 20111302
eggNOG COG2235
HOGENOM HOG000284536
KO K01478
OMA RDSSVWI
OrthoDB EOG65J52D
BioCyc AFIS312309:GIWP-415-MONOMER
UniPathway UPA00254
Proteomes UP000000537
GO GO:0005737
GO:0016990
GO:0019547
HAMAP MF_00242
InterPro IPR003198
IPR003876
Pfam PF02274
PIRSF PIRSF006356
PRINTS PR01466
TIGRFAMs TIGR01078

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0008218

bioluminescence

PMID:20693328[1]

ECO:0000315

P

Table 1

complete
CACAO 8762

GO:0008218

bioluminescence

PMID:23152924[2]

ECO:0000316

UniProtKB:P35328


P

fig 2

complete
CACAO 8845

GO:0050790

regulation of catalytic activity

PMID:20693328[1]

ECO:0000315

P

figure 2

complete
CACAO 9200

GO:0050790

regulation of catalytic activity

PMID:20693328[1]

ECO:0000315

P

figure 4

complete
CACAO 9201

involved_in

GO:0008218

bioluminescence

PMID:23152924[2]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P35328

P

Seeded From UniProt

complete

involved_in

GO:0008218

bioluminescence

PMID:20693328[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0018101

protein citrullination

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0016990

P

Seeded From UniProt

complete

involved_in

GO:0018101

protein citrullination

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0016990

P

Seeded From UniProt

complete

involved_in

GO:0018101

protein citrullination

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0016990

P

Seeded From UniProt

complete

involved_in

GO:0006527

arginine catabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003876

P

Seeded From UniProt

complete

enables

GO:0016990

arginine deiminase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003876

F

Seeded From UniProt

complete

enables

GO:0016990

arginine deiminase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.3.6

F

Seeded From UniProt

complete

enables

GO:0016990

arginine deiminase activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000082083

F

Seeded From UniProt

complete

involved_in

GO:0006527

arginine catabolic process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000082083

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000082083

C

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

involved_in

GO:0006525

arginine metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0056

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0019547

arginine catabolic process to ornithine

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00254

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Lyell, NL et al. (2010) Bright mutants of Vibrio fischeri ES114 reveal conditions and regulators that control bioluminescence and expression of the lux operon. J. Bacteriol. 192 5103-14 PubMed GONUTS page
  2. 2.0 2.1 Septer, AN & Stabb, EV (2012) Coordination of the arc regulatory system and pheromone-mediated positive feedback in controlling the Vibrio fischeri lux operon. PLoS ONE 7 e49590 PubMed GONUTS page