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VIBCH:FADR

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Species (Taxon ID) Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961). (243277)
Gene Name(s) fadR (ECO:0000255 with HAMAP-Rule:MF_00696)
Protein Name(s) Fatty acid metabolism regulator protein (ECO:0000255 with HAMAP-Rule:MF_00696)
External Links
UniProt Q9KQU8
EMBL AF489522
AE003852
PIR B82144
RefSeq NP_231534.1
ProteinModelPortal Q9KQU8
SMR Q9KQU8
STRING 243277.VC1900
DNASU 2613529
EnsemblBacteria AAF95048
GeneID 2613529
KEGG vch:VC1900
PATRIC 20082842
eggNOG COG2186
KO K03603
OMA INNFWET
OrthoDB EOG6D8B86
BioCyc VCHO:VC1900-MONOMER
Proteomes UP000000584
GO GO:0005737
GO:0003677
GO:0000062
GO:0003700
GO:0006631
GO:0071072
GO:0019217
GO:0006355
GO:0006351
Gene3D 1.10.10.10
1.20.120.530
HAMAP MF_00696
InterPro IPR014178
IPR028374
IPR008920
IPR000524
IPR011991
Pfam PF07840
PF00392
PRINTS PR00035
SMART SM00345
SUPFAM SSF48008
TIGRFAMs TIGR02812
PROSITE PS50949

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0071072

negative regulation of phospholipid biosynthetic process

PMID:21771112[1]

ECO:0000315

P

Figure 7, Figure 8

complete
CACAO 2237

involved_in

GO:0071072

negative regulation of phospholipid biosynthetic process

PMID:21771112[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0019217

regulation of fatty acid metabolic process

PMID:10952301[2]

ECO:0000250

sequence similarity evidence used in manual assertion

P

Seeded From UniProt

Missing: with/from

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:10952301[2]

ECO:0000250

sequence similarity evidence used in manual assertion

P

Seeded From UniProt

Missing: with/from

enables

GO:0003700

DNA-binding transcription factor activity

PMID:10952301[2]

ECO:0000250

sequence similarity evidence used in manual assertion

F

Seeded From UniProt

Missing: with/from

enables

GO:0000062

fatty-acyl-CoA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR014178
InterPro:IPR028374

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR014178

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000524
InterPro:IPR014178

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000524

P

Seeded From UniProt

complete

involved_in

GO:0019217

regulation of fatty acid metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR014178
InterPro:IPR028374

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000065677

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000065677

C

Seeded From UniProt

complete

involved_in

GO:0019217

regulation of fatty acid metabolic process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000065677

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000065677

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

involved_in

GO:0006629

lipid metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0443

P

Seeded From UniProt

complete

involved_in

GO:0006631

fatty acid metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0276

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Feng, Y & Cronan, JE (2011) The Vibrio cholerae fatty acid regulatory protein, FadR, represses transcription of plsB, the gene encoding the first enzyme of membrane phospholipid biosynthesis. Mol. Microbiol. 81 1020-33 PubMed GONUTS page
  2. 2.0 2.1 2.2 Heidelberg, JF et al. (2000) DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406 477-83 PubMed GONUTS page