User:Ryancallahan

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
unacceptable	SALTY:Q8ZQ03	2017-03-12 18:47:47 CDT	GO:0043709 cell adhesion involved in single-species biofilm formation (P)	PMID:23451197	ECO:0000315 mutant phenotype evidence used in manual assertion	Protein: ycfR Organism: Salmonella typhimurium strain LT2 A significant decrease in attachment to glass and polystyrene was observed in Salmonella typhimurium strain LT2 ycfR mutants when compared to attachment of the wild type strain (Figure 4 & Table 2)	challenge
acceptable	SALTY:Q7CPD6	2017-03-12 18:53:27 CDT	GO:0043709 cell adhesion involved in single-species biofilm formation (P)	PMID:23451197	ECO:0000315 mutant phenotype evidence used in manual assertion	Protein: yigG Organism: Salmonella typhimurium strain LT2 Salmonella typhimurium strain LT2 yigG mutants showed a significant decrease (P=0.0003) in attachment to polystyrene when compared to attachment of the wild type strain (Figure 4 & Table 2)	challenge
acceptable	SALET:A0A0F7J832	2017-03-25 18:23:50 CDT	GO:0043709 cell adhesion involved in single-species biofilm formation (P)	PMID:23451197	ECO:0000315 mutant phenotype evidence used in manual assertion	Protein: ycfR Organism: Salmonella enterica serovar Saintpaul strain 99A3746 As shown in Figure 4 and Table 2, ycfR mutants of Salmonella enterica serovar Saintpaul showed decreased attachment to glass surface when compared to the wild type strain (P=0.035).	challenge
unacceptable	SALT1:A0A0F6B2Q6	2017-04-05 11:41:27 CDT	GO:1900232 negative regulation of single-species biofilm formation on inanimate substrate (P)	PMID:17074910	ECO:0000315 mutant phenotype evidence used in manual assertion	Organism: Salmonella typhimurium strain 14028s Protein: motA According to figure 2, salmonella typhimurium stran 14028s mutants lacking motA exhibited lower biofilm formation than the wild type strain. Mutants did not colonize surfaces above or below the meniscus, and formed only a thin ring on the meniscus	challenge
acceptable	SALT1:A0A0F6B632	2017-04-05 11:49:48 CDT	GO:1900233 positive regulation of single-species biofilm formation on inanimate substrate (P)	PMID:17074910	ECO:0000315 mutant phenotype evidence used in manual assertion	Organism: Salmonella typhimurium strain 14028s Protein: barA According to figure 2, salmonella typhimurium strain 14028s mutants of barA showed reduced biofilm formation when compared to wild type strain	challenge

acceptable:3
unacceptable:2
requires_changes:0
flagged:0

Annotations challenged by Ryancallahan

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
updatedbyinstructor	Joshuakrank, Team Moldevort	SALTS:A0A0H3NF77	GO:0098864 - symbiont-mediated stabilization of host tight cell-cell junction (P)	PMID:25838979	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 2
unacceptable	SStone15, Team Lily Whale	MOUSE:RABP2	GO:0042573 - retinoic acid metabolic process (P)	PMID:27609837	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 1

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