CACAO Spring 2019
My Annotations
| Status | Page | Date/Time | GO Term (Aspect) | Reference | Evidence | Notes | Links |
|---|
| acceptable | 9CAUD:H6X3J8 | 2019-02-12 15:43:39 CST | GO:0019012 virion (C) | PMID:23593293 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Table S3 shows that gp041 has a molecular mass of 97.19 kDa and cellular components were determined via bioinformatics and MS/MS-based proteomics. Protein was not shown in fig. 5.
Organism: Klebsiella Phage vB_KleM-RaK2
| challenge |
| updatedbyinstructor | 9CAUD:H6X3M8 | 2019-02-12 15:53:36 CST | GO:0019012 virion (C) | PMID:23593293 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Table S3 shows that gp071 has a molecular mass of 131.63 kDa and cellular components were determined via bioinformatics and MS/MS-based proteomics. This protein is not specifically shown in figure 5.
Organism: Klebsiella Phage vB_KleM-RaK2
| challenge |
| acceptable | 9CAUD:H6X3G8 | 2019-02-26 16:06:52 CST | GO:0019012 virion (C) | PMID:23593293 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Figure 5 shows that gp 011 (ORF 011), a putative virion protein, of Klebsiella Phage vB_KleM-RaK2, produces a protein residue. Table S3 determines that gp 011 has a molecular mass of 12.065 kDa. Cellular components were determined via bioinformatics and MS/MS -based proteomics.
| challenge |
| acceptable | 9CAUD:H6X3J5 | 2019-02-26 16:19:04 CST | GO:0019012 virion (C) | PMID:23593293 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Figure 5 shows that gp 038 (ORF 038), a neck protein, of Klebsiella Phage vB_KleM-RaK2, produces a protein residue. Table S3 determines that gp 038 has a molecular mass of 30.294 kDa. Cellular components were determined via bioinformatics and MS/MS -based proteomics.
| challenge |
| updatedbyinstructor | 9CAUD:H6X3K8 | 2019-02-26 16:23:35 CST | GO:0019012 virion (C) | PMID:23593293 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Figure 5 and Table S3 show that gp 051 (ORF 051), a conserved phage protein, of Klebsiella Phage vB_KleM-RaK2, produces a protein residue. Cellular components were determined via bioinformatics and MS/MS -based proteomics.
| challenge |
| updatedbyinstructor | 9CAUD:A0A2P1CKJ3 | 2019-03-19 14:28:24 CDT | GO:0019012 virion (C) | PMID:30366363 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Table S3: Liquid chromatography mass spectrometry evidence identified gp18 (ORF18), a protein of Pantoea Bacteriophage vB_PagS_Vid5, as a component of the virion.
| challenge |
| acceptable | 9CAUD:A0A2P1CL82 | 2019-03-19 15:03:40 CDT | GO:0019012 virion (C) | PMID:30366363 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Page 583 shows that gp10 (ORF10), a putative EPS depolymerase enzyme, was identified by LC-MS/MS based proteomics as present in the virion of Pantoea Bacteriophage vB_PagS_Vid5. Table S3 shows gp10 to possess a molecular mass of 95.823 kDa.
| challenge |
| acceptable | 9CAUD:H6X3S0 | 2019-04-09 00:03:02 CDT | GO:0019012 virion (C) | PMID:23593293 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Fig. 5 shows that gp113 (ORF113), a putative single-stranded binding protein, produces a residue via SDS PAGE. Table S3 determines that gp113 has a molecular mass of 40.488 kDa. Cellular components were determined via MS/MS -based proteomics.
Organism: Klebsiella Phage vB_KleM-RaK2
| challenge |
| acceptable | 9CAUD:H6X3P9 | 2019-04-09 12:22:13 CDT | GO:0019012 virion (C) | PMID:23593293 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Fig. 5 shows that gp92 (ORF92), a prohead core scaffolding protein and protease, produces a residue via SDS PAGE. Table S3 determines that gp92 has a molecular mass of 22.870 kDa. Cellular components were determined via bioinformatics and MS/MS -based proteomics.
Organism: Klebsiella Phage vB_KleM-RaK2
| challenge |
| updatedbyinstructor | 9CAUD:A0A2P1CKJ9 | 2019-04-09 12:25:32 CDT | GO:0019012 virion (C) | PMID:30366363 | ECO:0001582 liquid chromatography coupled with tandem mass spectrometry evidence used in manual assertion | Page 583 shows that gp11 (ORF11), a head-tail adaptor, was identified by LC-MS/MS based proteomics as present in the virion of Pantoea Bacteriophage vB_PagS_Vid5. Table S3 shows that gp11 possesses a molecular mass of 18.734 kDa.
| challenge |
| acceptable | 9CAUD:H6X3P6 | 2019-04-09 12:32:21 CDT | GO:0019012 virion (C) | PMID:23593293 | ECO:0007184 protein mass spectrometry evidence used in manual assertion | Fig. 5 shows that gp089 (ORF089), a portal vertex protein, produces a residue via SDS PAGE. Table S3 determines that gp089 has a molecular mass of 64.744 kDa. Cellular components were determined via bioinformatics and MS/MS -based proteomics.
Organism: Klebsiella Phage vB_KleM-RaK2
| challenge |
acceptable:7
unacceptable:0
requires_changes:0
flagged:0
Annotations challenged by Rodrigzma3
| Status | Author,Group | Page | GO Term (Aspect) | Reference | Evidence | Links | Page history |
|---|
0 annotations fixed by Rodrigzma3
