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User:Mmohieddin

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CACAO Spring 2016

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
unacceptableRABIT:A9Z0W12016-04-15 12:32:39 CDTGO:0071735 IgG immunoglobulin complex (C)PMID:3256154ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 8 shows that when FcRn is overexpressed the IgG complex has a longer half-life

challenge
unacceptableRABIT:A9Z0W12016-04-15 12:32:40 CDTGO:0002925 positive regulation of humoral immune response mediated by circulating immunoglobulin (P)PMID:3256154ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 9 shows that overexpression of rabbit FcRn results in an augmented humoral immune response in transgenic rabbits.

challenge
acceptableRHOCB:SENC2016-04-12 02:24:45 CDTGO:1904960 positive regulation of cytochrome-c oxidase activity (P)PMID:7592491ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 4 shows a qualitative analysis of the effect of SenC mutation on cytochrome-c oxidase activity. Based on the figure, It was concluded that senC mutations exhibit greatly reduced, but not entirely absent, Cox activity.

challenge
unacceptableRHOCB:SENC2016-04-12 03:04:31 CDTGO:0009765 photosynthesis, light harvesting (P)PMID:7592491ECO:0000315 mutant phenotype evidence used in manual assertion

Figures 5 and 6 show that mutation in senC results in reduced levels of light-harvesting bacteriochlorophyll

complexes.

challenge
acceptableECOLI:SSNA2016-04-19 09:43:28 CDTGO:0030308 negative regulation of cell growth (P)PMID:10074077ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1 shows the negative effect of the ssnA on cell growth.

challenge
updatedbyinstructorARATH:GCA22016-04-19 02:35:40 CDTGO:0005747 mitochondrial respiratory chain complex I (C)PMID:26889912ECO:0000314 direct assay evidence used in manual assertion

Figure 1d

challenge
unacceptableARATH:GCA22016-04-19 02:43:36 CDTGO:2000375 negative regulation of oxygen metabolic process (P)PMID:26889912ECO:0000316 genetic interaction evidence used in manual assertion

Figure 5 shows that a double mutation in CA1 and CA2 result in increased oxygen consumption.

challenge
unacceptableARATH:GCA22016-04-19 02:48:09 CDTGO:1904959 regulation of cytochrome-c oxidase activity (P)PMID:26889912ECO:0000316 genetic interaction evidence used in manual assertion

Figure 4d shows that a double mutation in ca1 and ca2 drastically increase cytochrome-c oxidase activity. This suggests that ca2 along with ca1 negatively regulates cytochrome-c oxidase activity

challenge
unacceptableARATH:GCA12016-04-19 02:53:14 CDTGO:2000375 negative regulation of oxygen metabolic process (P)PMID:26889912ECO:0000316 genetic interaction evidence used in manual assertion

Figure 5 shows that a double mutation in ca1 and ca2 increases energy consumption. This suggests that ca1 negatively regulate oxygen consumption.

challenge
unacceptableARATH:GCA12016-04-19 03:05:32 CDTGO:1904959 regulation of cytochrome-c oxidase activity (P)PMID:26889912ECO:0000316 genetic interaction evidence used in manual assertion

Figure 4d shows that when a double mutation in ca1 and ca2 occurs, cytochrome-c oxidase activity increases drastically. Thus, the data suggests that ca1 negatively regulates cytochrome-c oxidase activity

challenge

acceptable:2
unacceptable:7
requires_changes:0
flagged:0

Annotations challenged by Mmohieddin

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