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ECOLI:SSNA
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | ssnA (synonyms: ygfL) | |
| Protein Name(s) | Protein SsnA | |
| External Links | ||
| UniProt | Q46812 | |
| EMBL | U28375 U00096 AP009048 D21141 | |
| PIR | G65071 | |
| RefSeq | NP_417355.4 YP_491081.1 | |
| ProteinModelPortal | Q46812 | |
| SMR | Q46812 | |
| DIP | DIP-10923N | |
| IntAct | Q46812 | |
| STRING | 511145.b2879 | |
| DNASU | 949072 | |
| EnsemblBacteria | AAC75917 BAE76945 | |
| GeneID | 12933332 949072 | |
| KEGG | ecj:Y75_p2812 eco:b2879 | |
| PATRIC | 32121168 | |
| EchoBASE | EB2874 | |
| EcoGene | EG13062 | |
| eggNOG | COG0402 | |
| HOGENOM | HOG000250646 | |
| InParanoid | Q46812 | |
| OMA | ETTDRNS | |
| OrthoDB | EOG6JB10K | |
| PhylomeDB | Q46812 | |
| BioCyc | EcoCyc:G7498-MONOMER ECOL316407:JW2847-MONOMER | |
| PRO | PR:Q46812 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | Q46812 | |
| GO | GO:0016810 GO:0046872 | |
| Gene3D | 2.30.40.10 | |
| InterPro | IPR006680 IPR011059 IPR017700 | |
| Pfam | PF01979 | |
| SUPFAM | SSF51338 | |
| TIGRFAMs | TIGR03314 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0016810 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
ECO:0000314 |
F |
Fig. 1B plots the difference in cell growth between two mutant plasmids, including SsnA. |
complete | |||||
|
enables |
GO:0050270 |
S-adenosylhomocysteine deaminase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001681698 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004000 |
adenosine deaminase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001681698 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016810 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
| GO:0030308 |
negative regulation of cell growth |
ECO:0000315 |
P |
Figure 1 shows the negative effect of the ssnA on cell growth. |
complete | |||||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Yamada, M et al. (1999) Characterization of the ssnA gene, which is involved in the decline of cell viability at the beginning of stationary phase in Escherichia coli. J. Bacteriol. 181 1838-46 PubMed GONUTS page
- ↑ 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
