User:Gjulie

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
unacceptable	9CAUD:S5Y020	2015-04-06 08:51:31 CDT	GO:0046080 regulation of dUTP diphosphatase activity (P)	PMID:381286	ECO:0000315 mutant phenotype evidence used in manual assertion	The function of this gene in the T5 phage can be concluded from a mutant phenotype. Figure 4 in the referenced paper shows that the dut mutant T5 phage made was not able to induce dUTPase activity. This gives us evidence to conclude that the function of that gene is a dUTPase. IMP can also be assigned to this phage with evidence from an experimental paper that states the function of a dUTPase.	challenge
unacceptable	9CAUD:S5Y020	2015-04-06 08:51:31 CDT	GO:0004170 dUTP diphosphatase activity (F)	GO_REF:0000100	ECO:0000247 sequence alignment evidence used in manual assertion	BlastP showed that the Troll gene is a homolog to a gene from another bacteriphage, Bacillus phage VB_BCEMBc431v3. The alignment gave an e-value of 1e-122, 93%query cover and 60% identity. Evidence for the function of the Bacillus phage gene is given through experimental evidence done on the phage, T5. The Troll gene also aligned with other dUTP diphosphatase proteins. This is evidence to conclude that the two genes are homologous. The function of this gene is in the reaction that converts dUTP to dUMP.	challenge

acceptable:0
unacceptable:2
requires_changes:0
flagged:0

Annotations challenged by Gjulie

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
updatedbyinstructor	Wmimi, TeamBlue	9CAUD:S5Y0L8	GO:0098027 - virus tail, sheath (C)	GO_REF:0000100	ECO:0000247 sequence alignment evidence used in manual assertion	challenge	C: 3

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