THEAQ:SIGA

Species (Taxon ID)	Thermus aquaticus. (271)
Gene Name(s)	sigA (ECO:0000255 with HAMAP-Rule:MF_00963)
Protein Name(s)	RNA polymerase sigma factor SigA (ECO:0000255 with HAMAP-Rule:MF_00963)
External Links
UniProt	Q9EZJ8
EMBL	AF291720
PDB	1KU2 1KU3 1KU7 1L9U 1L9Z 1RIO 3LES 3LEV 3N97 3UGO 3UGP 4KI2 4XLN 4XLP 4XLQ 4XLR 4XLS
PDBsum	1KU2 1KU3 1KU7 1L9U 1L9Z 1RIO 3LES 3LEV 3N97 3UGO 3UGP 4KI2 4XLN 4XLP 4XLQ 4XLR 4XLS
ProteinModelPortal	Q9EZJ8
SMR	Q9EZJ8
DIP	DIP-49014N
STRING	498848.TaqDRAFT_4448
eggNOG	ENOG4105DG1 COG0568
EvolutionaryTrace	Q9EZJ8
GO	GO:0005737 GO:0003677 GO:0016987 GO:0003700 GO:0001123
Gene3D	1.10.10.10
HAMAP	MF_00963
InterPro	IPR014284 IPR000943 IPR009042 IPR007627 IPR007624 IPR007630 IPR013325 IPR013324 IPR012760 IPR028630 IPR011991
Pfam	PF00140 PF04542 PF04539 PF04545
PRINTS	PR00046
SUPFAM	SSF88659 SSF88946
TIGRFAMs	TIGR02393 TIGR02937
PROSITE	PS00716

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0016987	sigma factor activity	PMID:11931761	ECO:0000314			F		Figure 2 Structure and Function of sigma2-3	complete CACAO 11427
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR009042 InterPro:IPR012760	F		Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000943 InterPro:IPR007624 InterPro:IPR007627 InterPro:IPR007630 InterPro:IPR009042 InterPro:IPR013325 InterPro:IPR014284	F		Seeded From UniProt	complete
involved_in	GO:0006352	DNA-templated transcription, initiation	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000943 InterPro:IPR007624 InterPro:IPR007627 InterPro:IPR007630 InterPro:IPR009042 InterPro:IPR012760 InterPro:IPR013325 InterPro:IPR014284 InterPro:IPR028630	P		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000943 InterPro:IPR007624 InterPro:IPR007627 InterPro:IPR007630 InterPro:IPR009042 InterPro:IPR012760 InterPro:IPR013325 InterPro:IPR014284	P		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR009042 InterPro:IPR012760 InterPro:IPR028630	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	F		Seeded From UniProt	complete
involved_in	GO:0001123	transcription initiation from bacterial-type RNA polymerase promoter	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	P		Seeded From UniProt	complete
involved_in	GO:0010468	regulation of gene expression	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	P		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	C		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	F		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0731	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0731	F		Seeded From UniProt	complete
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References

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