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TAIR:PAL1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | PAL1 ( synonyms: AT2G37040, ATPAL1, AT2G37040.1, T1J8.22, T1J8_22, CI0004, PAL1, PHE ammonia lyase 1 ) | |
| Protein Name(s) | PHE ammonia lyase 1, AT2G37040, | |
| External Links | ||
| TAIR | locus:2057981 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003824 |
catalytic activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR008948 |
F |
From TAIR |
||
| GO:0005737 |
cytoplasm |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005922 |
C |
From TAIR |
||
| GO:0005737 |
cytoplasm |
TAIR:AnalysisReference:501750651 |
ISM: Inferred from Sequence Model |
C |
From TAIR |
|||
| GO:0006559 |
L-phenylalanine catabolic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005922 |
P |
From TAIR |
||
| GO:0006598 |
polyamine catabolic process |
TAIR:Publication:501748728 |
RCA: Inferred from Reviewed Computational Analysis |
P |
From TAIR |
|||
| GO:0006952 |
defense response |
TAIR:Publication:4577 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0006979 |
response to oxidative stress |
TAIR:Publication:501714511 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0009058 |
biosynthetic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001106 |
P |
From TAIR |
||
| GO:0009555 |
pollen development |
TAIR:Publication:501738125 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009611 |
response to wounding |
TAIR:Publication:4577 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0009611 |
response to wounding |
TAIR:Publication:501748728 |
RCA: Inferred from Reviewed Computational Analysis |
P |
From TAIR |
|||
| GO:0009698 |
phenylpropanoid metabolic process |
TAIR:Publication:501748728 |
RCA: Inferred from Reviewed Computational Analysis |
P |
From TAIR |
|||
| GO:0009699 |
phenylpropanoid biosynthetic process |
TAIR:Publication:501675229 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0009805 |
coumarin biosynthetic process |
TAIR:Publication:501748728 |
RCA: Inferred from Reviewed Computational Analysis |
P |
From TAIR |
|||
| GO:0009819 |
drought recovery |
TAIR:Publication:501738125 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009963 |
positive regulation of flavonoid biosynthetic process |
TAIR:Publication:501748728 |
RCA: Inferred from Reviewed Computational Analysis |
P |
From TAIR |
|||
| GO:0010224 |
response to UV-B |
TAIR:Publication:501738125 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016841 |
ammonia-lyase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001106 |
F |
From TAIR |
||
| GO:0042398 |
cellular modified amino acid biosynthetic process |
TAIR:Publication:501748728 |
RCA: Inferred from Reviewed Computational Analysis |
P |
From TAIR |
|||
| GO:0045548 |
phenylalanine ammonia-lyase activity |
TAIR:Publication:4577 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR001106 |
F |
From TAIR |
||
| GO:0045548 |
phenylalanine ammonia-lyase activity |
TAIR:Publication:501675229 |
TAS: Traceable Author Statement |
F |
From TAIR |
|||
| GO:0045548 |
phenylalanine ammonia-lyase activity |
TAIR:Publication:501738125 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0046244 |
salicylic acid catabolic process |
TAIR:Publication:501738125 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0046274 |
lignin catabolic process |
TAIR:Publication:501738125 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0080167 |
response to karrikin |
TAIR:Publication:501736304 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Heyndrickx, KS & Vandepoele, K (2012) Systematic identification of functional plant modules through the integration of complementary data sources. Plant Physiol. 159 884-901 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Wanner, LA et al. (1995) The phenylalanine ammonia-lyase gene family in Arabidopsis thaliana. Plant Mol. Biol. 27 327-38 PubMed GONUTS page
- ↑ Stanley Kim, H et al. (2005) Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. Plant J. 41 212-20 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 Huang, J et al. (2010) Functional analysis of the Arabidopsis PAL gene family in plant growth, development, and response to environmental stress. Plant Physiol. 153 1526-38 PubMed GONUTS page
- ↑ Nelson, DC et al. (2010) Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. Proc. Natl. Acad. Sci. U.S.A. 107 7095-100 PubMed GONUTS page
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