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GO:0003887DNA-directed DNA polymerase activityPMID:22108584ECO:0001258 IDA: Inferred from Direct AssayMolecular Function
The gp43 protein from the bacteriophage BFK20 of the Brevibacterium flavum was suspected to exhibit polymerase activity. The gp43 was isolated and its polymerase activity was quantified by the amount of released free pyrophosphate through a colorimetric spectrophotometer analysis in vitro. The reaction mixture contained ssDNA and dNTP, and the addition of gp43 started the reaction with single-stranded DNA used as the template. Aliquots from the mixture were then added to thermostable inorganic pyrophosphatase.The phosphate that was released was quantified through a colorimetric spectrophotometer analysis, and results were shown in Figure 4. A negative control consisted of the reaction mixture without the thermostable inorganic pyrophosphatase. The negative control was subtracted from the experimental values to obtain the amount of phosphate released. From this procedure, researchers concluded that the gp43 protein was able to synthesize DNA.
complete
This annotation made on page: 9CAUD:Q3V5F2
By: Shreya1 (group Team Purple B 2019) on 2019-04-10 10:32:18 CDT.




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
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Assessment
Ivanerill2019-04-20 04:52:20 CDT

great work!

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DanielRenfro2019-04-18 16:34:51 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0003887 DNA-directed DNA polymerase activity PMID:22108584 ECO:0001258 IDA: Inferred from Direct Assay F The gp43 protein from the bacteriophage BFK20 of the Brevibacterium flavum was suspected to exhibit polymerase activity. To purify samples of gp43, a plasmid that produces gp43 was transformed into E. coli, these cells were centrifuged, the supernatant was loaded onto a cobalt-affinity chromatography column, and the gp43 was collected from the column. The polymerase activity of gp43 was quantified by the amount of released free pyrophosphate through a colorimetric spectrophotometer analysis in vitro. The reaction mixture contained ssDNA and dNTP, and the addition of gp43 started the reaction with single-stranded DNA used as the template. Aliquots from the mixture were then added to thermostable inorganic pyrophosphatase.The phosphate that was released was quantified through a colorimetric spectrophotometer analysis, and results were shown in Figure 4. A negative control consisted of the reaction mixture without the thermostable inorganic pyrophosphatase. The negative control was subtracted from the experimental values to obtain the amount of phosphate released. From this procedure, researchers concluded that the gp43 protein was able to synthesize DNA. complete
CACAO 13720
on 9CAUD:Q3V5F2
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Ivanerill2019-04-17 23:26:46 CDT

Please reword more technically: "The gp43 was isolated"

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