GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

Cacao

Jump to: navigation, search

The row for this annotation cannot be found. This might be due to a row or page getting deleted.

GO:0008979prophage integrase activityPMID:10383974IDA: Inferred from Direct Assay F
This annotation made on page:
By: SSingh (group Team Purple B 2018) on 2018-03-16 22:28:53 CDT.




You must be logged in to challenge this annotation.

Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
ChallengeTBurnett,
Team Blue A 2018
2018-03-20 19:08:08 CDT

Fig 6 is largely a summarization and diagram of the results following PCR with the different primer pairs for the plasmid pAY721. Fig 8 shows the actual PCR results that Fig 6 summarizes. Noting Fig 6 and 8 in the annotation will likely lead to a stronger line of evidence.

1
Public
Assessment
Scaruso2018-03-22 20:32:17 CDT

The challenge is correct that fig. 8 contains the experimental data, though I think it will be difficult to explain. A more significant issue is that the protein being annotated is incorrect. This is not Int in coliphage Lambda. This paper is examining phage Mx8, which infects Myxococcus xanthus. It's Int gene is examined in Table 2, Figure 3, and Figure 4. The rest of the paper looks at the att sites.

Unacceptable
Protein