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Cacao

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GO:00611583'-UTR-mediated mRNA destabilizationPMID:28275056IMP: Inferred from Mutant Phenotype P
This annotation made on page: HUMAN:FUBP2
By: TheBockster (group Team Daytona Bronze Viper) on 2017-03-25 20:20:35 CDT.




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
Private
Assessment
Suzialeksander2017-04-18 15:52:15 CDTYou need to be an instructor to view these notes.Acceptable
Protein
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Evidence
With/From
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Public
Assessment
DanielRenfro2017-04-16 18:34:27 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0061158 3'-UTR-mediated mRNA destabilization PMID:28275056 IMP: Inferred from Mutant Phenotype P Paper’s Protein Name: K homology splicing regulatory protein (KSRP).

UniProt’s Protein Name: Far upstream element-binding protein 2 OR ALTERNATIVELY KH type-splicing regulatory protein. Organism: Homo sapiens. Notes: Figure 6E is used. Figure 4 had already demonstrated that KSRP downregulates the Spry4 protein, and Figure 5D had already demonstrated that KSRP binds to the 3’-UTR mRNA of the Spry4 gene. In the paper, it is claimed that “if the effects of KSRP on Spry4 3’UTR were specific; then upon KSRP knockdown, the KSRP-mediated mRNA repression should be relaxed, as detected by an increase in luciferase activities. Indeed, knockdown of KSRP increased the luciferase activities of Luc-Spry4 UTR, but not the luciferase activities of Luc-Spry4 UTR-F1.” The chart in Figure 6E does indeed show that luciferase activities approximately double when KSRP is mutated. Thus, KSRP destabilizes the mRNA of Spry4 by binding to the 3’-UTR region.||complete
CACAO 12364

on HUMAN:FUBP2
Flagged
Private
Assessment
Suzialeksander2017-04-12 15:14:00 CDTYou need to be an instructor to view these notes.Requires Changes
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original