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STRTR:CAS3
Contents
Species (Taxon ID) | Streptococcus thermophilus. (1308) | |
Gene Name(s) | cas3 | |
Protein Name(s) | CRISPR-associated nuclease/helicase Cas3 | |
External Links | ||
UniProt | F2XG53 | |
EMBL | HQ453272 | |
GO | GO:0005524 GO:0004536 GO:0004386 GO:0046872 GO:0003676 GO:0006308 | |
Gene3D | 1.10.3210.10 3.40.50.300 | |
InterPro | IPR006483 IPR011545 IPR006674 IPR014001 IPR001650 IPR006474 IPR027417 | |
Pfam | PF00270 PF00271 | |
SMART | SM00487 SM00490 | |
SUPFAM | SSF52540 | |
TIGRFAMs | TIGR01587 TIGR01596 | |
PROSITE | PS51643 PS51192 PS51194 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0004536 |
deoxyribonuclease activity |
ECO:0000314 |
F |
Figure 3 (A) shows the nuclease activity of Cas3 in the presence of MG2+ ions. Incubating Cas3 with M13mp18 ssDNA over a two hour period shows increased levels of Cas3 correspond to increased ssDNA degradation. |
complete | |||||
enables |
GO:0004536 |
deoxyribonuclease activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006259 |
DNA metabolic process |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004536 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006259 |
DNA metabolic process |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004536 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004518 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004536 |
deoxyribonuclease activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0033680 |
ATP-dependent DNA/RNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004518 |
nuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Sinkunas, T et al. (2011) Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system. EMBO J. 30 1335-42 PubMed GONUTS page