GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
SORBI:C5YH12
Contents
| Species (Taxon ID) | Sorghum bicolor (Sorghum) (Sorghum vulgare). (4558) | |
| Gene Name(s) | Sb07g003860 (ECO:0000313 with EMBL:EES14578.1) | |
| Protein Name(s) | Caffeic acid O-methyltransferase (ECO:0000313 with EMBL:ADW65743.1)
Putative uncharacterized protein Sb07g003860 (ECO:0000313 with EMBL:EES14578.1) | |
| External Links | ||
| UniProt | C5YH12 | |
| EMBL | HQ661801 CM000766 | |
| RefSeq | XP_002445083.1 | |
| UniGene | Sbi.6103 | |
| PDB | 4PGG 4PGH | |
| PDBsum | 4PGG 4PGH | |
| EnsemblPlants | Sb07g003860.1 | |
| GeneID | 8069622 | |
| KEGG | sbi:SORBI_07g003860 | |
| eggNOG | KOG3178 | |
| HOGENOM | HOG000238276 | |
| KO | K05279 | |
| OMA | YLTPNED | |
| Proteomes | UP000000768 | |
| GO | GO:0047763 | |
| Gene3D | 1.10.10.10 3.40.50.150 | |
| InterPro | IPR022657 IPR016461 IPR001077 IPR012967 IPR029063 IPR011991 | |
| Pfam | PF08100 PF00891 | |
| PIRSF | PIRSF005739 | |
| SUPFAM | SSF53335 | |
| PROSITE | PS00879 PS51683 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009809 |
lignin biosynthetic process |
ECO:0000315 |
P |
Figures 1 & 2 demonstrate the reduced presence of monolignol biosynthetic precursors. Figure 3 shows the reduced expression of the gene. Figure 7 shows CAPS evidence for the presence of premature stop codon. |
complete | |||||
|
involved_in |
GO:0051555 |
flavonol biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ZD89 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0030744 |
luteolin O-methyltransferase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ZD89 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030187 |
melatonin biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ZD89 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0017096 |
acetylserotonin O-methyltransferase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ZD89 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009809 |
lignin biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ZD89 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008171 |
O-methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046983 |
protein dimerization activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0047763 |
caffeate O-methyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032259 |
methylation |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Bout, S & Vermerris, W (2003) A candidate-gene approach to clone the sorghum Brown midrib gene encoding caffeic acid O-methyltransferase. Mol. Genet. Genomics 269 205-14 PubMed GONUTS page