GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

SORBI:C5YH12

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Sorghum bicolor (Sorghum) (Sorghum vulgare). (4558)
Gene Name(s) Sb07g003860 (ECO:0000313 with EMBL:EES14578.1)
Protein Name(s) Caffeic acid O-methyltransferase (ECO:0000313 with EMBL:ADW65743.1)

Putative uncharacterized protein Sb07g003860 (ECO:0000313 with EMBL:EES14578.1)

External Links
UniProt C5YH12
EMBL HQ661801
CM000766
RefSeq XP_002445083.1
UniGene Sbi.6103
PDB 4PGG
4PGH
PDBsum 4PGG
4PGH
EnsemblPlants Sb07g003860.1
GeneID 8069622
KEGG sbi:SORBI_07g003860
eggNOG KOG3178
HOGENOM HOG000238276
KO K05279
OMA YLTPNED
Proteomes UP000000768
GO GO:0047763
Gene3D 1.10.10.10
3.40.50.150
InterPro IPR022657
IPR016461
IPR001077
IPR012967
IPR029063
IPR011991
Pfam PF08100
PF00891
PIRSF PIRSF005739
SUPFAM SSF53335
PROSITE PS00879
PS51683

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009809

lignin biosynthetic process

PMID:12756532[1]

ECO:0000315

P

Figures 1 & 2 demonstrate the reduced presence of monolignol biosynthetic precursors. Figure 3 shows the reduced expression of the gene. Figure 7 shows CAPS evidence for the presence of premature stop codon.

complete

involved_in

GO:0051555

flavonol biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6ZD89
RAP2018-11-26:Os08t0157500-01

P

Seeded From UniProt

complete

enables

GO:0030744

luteolin O-methyltransferase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6ZD89
RAP2018-11-26:Os08t0157500-01

F

Seeded From UniProt

complete

involved_in

GO:0030187

melatonin biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6ZD89
RAP2018-11-26:Os08t0157500-01

P

Seeded From UniProt

complete

enables

GO:0017096

acetylserotonin O-methyltransferase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6ZD89
RAP2018-11-26:Os08t0157500-01

F

Seeded From UniProt

complete

involved_in

GO:0009809

lignin biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6ZD89
RAP2018-11-26:Os08t0157500-01

P

Seeded From UniProt

complete

enables

GO:0008168

methyltransferase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR016461

F

Seeded From UniProt

complete

enables

GO:0008171

O-methyltransferase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001077

F

Seeded From UniProt

complete

enables

GO:0046983

protein dimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012967

F

Seeded From UniProt

complete

enables

GO:0047763

caffeate O-methyltransferase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.1.1.68

F

Seeded From UniProt

complete

enables

GO:0008168

methyltransferase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0489

F

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

involved_in

GO:0032259

methylation

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0489

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Bout, S & Vermerris, W (2003) A candidate-gene approach to clone the sorghum Brown midrib gene encoding caffeic acid O-methyltransferase. Mol. Genet. Genomics 269 205-14 PubMed GONUTS page