GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
Have any questions? Please email us at ecoliwiki@gmail.com
SOLLC:F2YHL2
Contents
Species (Taxon ID) | Solanum lycopersicum (Tomato) (Lycopersicon esculentum). (4081) | |
Gene Name(s) | LOC100736470 (ECO:0000313 with EnsemblPlants:Solyc01g068060.2.1) | |
Protein Name(s) | Autophagy-related protein (ECO:0000256 with RuleBase:RU004384) | |
External Links | ||
UniProt | F2YHL2 | |
EMBL | JF261157 | |
RefSeq | NP_001234639.1 | |
UniGene | Les.8690 | |
IntAct | F2YHL2 | |
EnsemblPlants | Solyc01g068060.2.1 | |
GeneID | 100736470 | |
KEGG | sly:100736470 | |
InParanoid | F2YHL2 | |
KO | K08341 | |
OMA | LMDSVYE | |
Proteomes | UP000004994 | |
GO | GO:0000421 GO:0033110 GO:0005874 GO:0006914 GO:0046482 GO:0015031 | |
InterPro | IPR004241 IPR029071 | |
PANTHER | PTHR10969 | |
Pfam | PF02991 | |
SUPFAM | SSF54236 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0048102 |
autophagic cell death |
ECO:0000316 |
|
P |
Fig. 3 Co silencing the genes in plants at 3 and 5 weeks. |
complete | ||||
involved_in |
GO:0006995 |
cellular response to nitrogen starvation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000103522 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006914 |
autophagy |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Devarenne, TP (2011) The plant cell death suppressor Adi3 interacts with the autophagic protein Atg8h. Biochem. Biophys. Res. Commun. 412 699-703 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page