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SALTY:SSB
Contents
| Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
| Gene Name(s) | ssb | |
| Protein Name(s) | Single-stranded DNA-binding protein
SSB Helix-destabilizing protein | |
| External Links | ||
| UniProt | P0A2F6 | |
| EMBL | AE006468 M93014 | |
| RefSeq | NP_463121.1 | |
| ProteinModelPortal | P0A2F6 | |
| SMR | P0A2F6 | |
| STRING | 99287.STM4256 | |
| PaxDb | P0A2F6 | |
| PRIDE | P0A2F6 | |
| EnsemblBacteria | AAL23080 | |
| GeneID | 1255782 | |
| KEGG | stm:STM4256 | |
| PATRIC | 32387415 | |
| eggNOG | COG0629 | |
| HOGENOM | HOG000106483 | |
| KO | K03111 | |
| OMA | QQYNEPP | |
| OrthoDB | EOG6M9F32 | |
| ProtClustDB | PRK09010 | |
| BioCyc | SENT99287:GCTI-4287-MONOMER | |
| GO | GO:0003697 GO:0006281 GO:0006260 | |
| Gene3D | 2.40.50.140 | |
| InterPro | IPR012340 IPR000424 IPR011344 | |
| PANTHER | PTHR10302 | |
| Pfam | PF00436 | |
| PIRSF | PIRSF002070 | |
| SUPFAM | SSF50249 | |
| TIGRFAMs | TIGR00621 | |
| PROSITE | PS50935 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0031230 |
intrinsic to cell outer membrane |
ECO:0000314 |
C |
Additional File 1 |
complete | |||||
|
involved_in |
GO:0051096 |
positive regulation of helicase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000033807 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009295 |
nucleoid |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000033807 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10976 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000119535 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000119535 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000119535 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000119535 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page