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SALTY:SIPD
Contents
| Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
| Gene Name(s) | sipD (synonyms: sspD) | |
| Protein Name(s) | Cell invasion protein SipD
Salmonella invasion protein D | |
| External Links | ||
| UniProt | Q56026 | |
| EMBL | U30491 U40013 AE006468 | |
| PIR | S70549 | |
| RefSeq | NP_461804.1 YP_005182751.1 YP_009073642.1 | |
| PDB | 2YM0 2YM9 3NZZ 3O00 3O01 3O02 3ZQB 3ZQE | |
| PDBsum | 2YM0 2YM9 3NZZ 3O00 3O01 3O02 3ZQB 3ZQE | |
| ProteinModelPortal | Q56026 | |
| STRING | 99287.STM2883 | |
| TCDB | 1.C.36.3.2 | |
| PaxDb | Q56026 | |
| PRIDE | Q56026 | |
| EnsemblBacteria | AAL21763 | |
| GeneID | 1254406 | |
| KEGG | stm:STM2883 | |
| PATRIC | 32384454 | |
| eggNOG | NOG27430 | |
| HOGENOM | HOG000028233 | |
| KO | K13287 | |
| OMA | NYLGVYE | |
| OrthoDB | EOG6JQGZG | |
| BioCyc | SENT99287:GCTI-2899-MONOMER | |
| EvolutionaryTrace | Q56026 | |
| Proteomes | UP000001014 | |
| GO | GO:0005576 GO:0009405 | |
| InterPro | IPR009483 IPR013386 | |
| Pfam | PF06511 | |
| TIGRFAMs | TIGR02553 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009405 |
pathogenesis |
ECO:0000314 |
P |
Figure 8 shows the results of a Salmonella invasion assay as a function of SipD point mutations. |
complete | |||||
| GO:0009405 |
pathogenesis |
ECO:0000315 |
P |
Figure 8 shows the results of a Salmonella invasion assay as a function of SipD point mutations. |
complete | |||||
| GO:0009405 |
pathogenesis |
ECO:0000270 |
P |
SipD proteins are crucial components to salmonella cell invasion. Fig. 1 shows animal deaths as a function of time with tagged SipD protein expression. |
complete | |||||
|
involved_in |
GO:0009405 |
pathogenesis |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009405 |
pathogenesis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Rathinavelan, T et al. (2011) Characterization of the interaction between the Salmonella type III secretion system tip protein SipD and the needle protein PrgI by paramagnetic relaxation enhancement. J. Biol. Chem. 286 4922-30 PubMed GONUTS page
- ↑ Gong, H et al. (2010) Differential expression of Salmonella type III secretion system factors InvJ, PrgJ, SipC, SipD, SopA and SopB in cultures and in mice. Microbiology (Reading, Engl.) 156 116-27 PubMed GONUTS page