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SALTY:RLPA
Contents
| Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
| Gene Name(s) | rlpA | |
| Protein Name(s) | Rare lipoprotein A | |
| External Links | ||
| UniProt | Q8ZR01 | |
| EMBL | AE006468 | |
| RefSeq | NP_459630.1 | |
| ProteinModelPortal | Q8ZR01 | |
| STRING | 99287.STM0638 | |
| PaxDb | Q8ZR01 | |
| PRIDE | Q8ZR01 | |
| EnsemblBacteria | AAL19589 | |
| GeneID | 1252158 | |
| KEGG | stm:STM0638 | |
| PATRIC | 32379627 | |
| eggNOG | COG0797 | |
| HOGENOM | HOG000117956 | |
| KO | K03642 | |
| OMA | QSFIAVA | |
| OrthoDB | EOG6ZH2CB | |
| BioCyc | SENT99287:GCTI-641-MONOMER | |
| Proteomes | UP000001014 | |
| GO | GO:0005886 | |
| Gene3D | 3.30.70.1070 | |
| InterPro | IPR009009 IPR012997 IPR007730 | |
| Pfam | PF03330 PF05036 | |
| SUPFAM | SSF110997 SSF50685 | |
| TIGRFAMs | TIGR00413 | |
| PROSITE | PS51257 PS51724 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
|
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10854 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042834 |
peptidoglycan binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000270 |
peptidoglycan metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000375593 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008932 |
lytic endotransglycosylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000375593 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0071555 |
cell wall organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page