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SALTY:Q8ZQF3

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Species (Taxon ID) Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287)
Gene Name(s) ybjR (ECO:0000313 with EMBL:AAL19867.1)
Protein Name(s) Putative aminidase (ECO:0000313 with EMBL:AAL19867.1)
External Links
UniProt Q8ZQF3
EMBL AE006468
RefSeq NP_459908.1
ProteinModelPortal Q8ZQF3
SMR Q8ZQF3
STRING 99287.STM0931
PRIDE Q8ZQF3
EnsemblBacteria AAL19867
GeneID 1252450
KEGG stm:STM0931
PATRIC 32380269
HOGENOM HOG000255964
KO K11066
OMA IGAWPDE
OrthoDB EOG60GRR5
PhylomeDB Q8ZQF3
BioCyc SENT99287:GCTI-938-MONOMER
Proteomes UP000001014
GO GO:0008745
GO:0009253
Gene3D 3.40.80.10
InterPro IPR002502
IPR002477
Pfam PF01510
SMART SM00644
SUPFAM SSF47090
SSF55846

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009279

cell outer membrane

PMID:20149234[1]

ECO:0000314

C

Additional file 2: Comparison of the outer membrane proteins identified

complete

part_of

GO:0019867

outer membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG13687
PANTHER:PTN001252283

C

Seeded From UniProt

complete

involved_in

GO:0009254

peptidoglycan turnover

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10041
PANTHER:PTN001252273

P

Seeded From UniProt

complete

involved_in

GO:0009253

peptidoglycan catabolic process

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG13687
PANTHER:PTN001252273

P

Seeded From UniProt

complete

enables

GO:0008745

N-acetylmuramoyl-L-alanine amidase activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG13687
PANTHER:PTN001252273
UniProtKB:G3XCW9
UniProtKB:Q9HT86
UniProtKB:Q9I5D1

F

Seeded From UniProt

complete

enables

GO:0008745

N-acetylmuramoyl-L-alanine amidase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002502
InterPro:IPR036505

F

Seeded From UniProt

complete

involved_in

GO:0009253

peptidoglycan catabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002502
InterPro:IPR036505

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page