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SALTY:Q8ZQF3
Contents
Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
Gene Name(s) | ybjR (ECO:0000313 with EMBL:AAL19867.1) | |
Protein Name(s) | Putative aminidase (ECO:0000313 with EMBL:AAL19867.1) | |
External Links | ||
UniProt | Q8ZQF3 | |
EMBL | AE006468 | |
RefSeq | NP_459908.1 | |
ProteinModelPortal | Q8ZQF3 | |
SMR | Q8ZQF3 | |
STRING | 99287.STM0931 | |
PRIDE | Q8ZQF3 | |
EnsemblBacteria | AAL19867 | |
GeneID | 1252450 | |
KEGG | stm:STM0931 | |
PATRIC | 32380269 | |
HOGENOM | HOG000255964 | |
KO | K11066 | |
OMA | IGAWPDE | |
OrthoDB | EOG60GRR5 | |
PhylomeDB | Q8ZQF3 | |
BioCyc | SENT99287:GCTI-938-MONOMER | |
Proteomes | UP000001014 | |
GO | GO:0008745 GO:0009253 | |
Gene3D | 3.40.80.10 | |
InterPro | IPR002502 IPR002477 | |
Pfam | PF01510 | |
SMART | SM00644 | |
SUPFAM | SSF47090 SSF55846 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
part_of |
GO:0019867 |
outer membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009254 |
peptidoglycan turnover |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10041 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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