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SALTY:Q8ZQF3
Contents
| Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
| Gene Name(s) | ybjR (ECO:0000313 with EMBL:AAL19867.1) | |
| Protein Name(s) | Putative aminidase (ECO:0000313 with EMBL:AAL19867.1) | |
| External Links | ||
| UniProt | Q8ZQF3 | |
| EMBL | AE006468 | |
| RefSeq | NP_459908.1 | |
| ProteinModelPortal | Q8ZQF3 | |
| SMR | Q8ZQF3 | |
| STRING | 99287.STM0931 | |
| PRIDE | Q8ZQF3 | |
| EnsemblBacteria | AAL19867 | |
| GeneID | 1252450 | |
| KEGG | stm:STM0931 | |
| PATRIC | 32380269 | |
| HOGENOM | HOG000255964 | |
| KO | K11066 | |
| OMA | IGAWPDE | |
| OrthoDB | EOG60GRR5 | |
| PhylomeDB | Q8ZQF3 | |
| BioCyc | SENT99287:GCTI-938-MONOMER | |
| Proteomes | UP000001014 | |
| GO | GO:0008745 GO:0009253 | |
| Gene3D | 3.40.80.10 | |
| InterPro | IPR002502 IPR002477 | |
| Pfam | PF01510 | |
| SMART | SM00644 | |
| SUPFAM | SSF47090 SSF55846 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
|
part_of |
GO:0019867 |
outer membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009254 |
peptidoglycan turnover |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10041 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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