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SALTY:Q8ZQ08

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Species (Taxon ID) Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287)
Gene Name(s) lpoB (ECO:0000255 with HAMAP-Rule:MF_01889)
Protein Name(s) Penicillin-binding protein activator LpoB (ECO:0000255 with HAMAP-Rule:MF_01889)

PBP activator LpoB (ECO:0000255 with HAMAP-Rule:MF_01889)

External Links
UniProt Q8ZQ08
EMBL AE006468
RefSeq NP_460177.1
PDB 4Q6L
4Q6V
PDBsum 4Q6L
4Q6V
STRING 99287.STM1207
PaxDb Q8ZQ08
PRIDE Q8ZQ08
EnsemblBacteria AAL20136
GeneID 1252725
KEGG stm:STM1207
PATRIC 32380863
eggNOG COG3417
HOGENOM HOG000119084
KO K07337
OMA EIVWSGN
OrthoDB EOG6SJJMG
PhylomeDB Q8ZQ08
BioCyc SENT99287:GCTI-1216-MONOMER
Proteomes UP000001014
GO GO:0031241
GO:0030234
GO:0009252
GO:0008360
HAMAP MF_01889
InterPro IPR014094
Pfam PF13036
TIGRFAMs TIGR02722
PROSITE PS51257

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009279

cell outer membrane

PMID:20149234[1]

ECO:0000314

C

Additional file 2: Comparison of the outer membrane proteins identified

complete

part_of

GO:0031241

periplasmic side of cell outer membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG13431
PANTHER:PTN002221028

C

Seeded From UniProt

complete

enables

GO:0030234

enzyme regulator activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG13431
PANTHER:PTN002221028

F

Seeded From UniProt

complete

involved_in

GO:0009252

peptidoglycan biosynthetic process

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG13431
PANTHER:PTN002221028

P

Seeded From UniProt

complete

involved_in

GO:0050790

regulation of catalytic activity

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0030234

P

Seeded From UniProt

complete

involved_in

GO:0050790

regulation of catalytic activity

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0030234

P

Seeded From UniProt

complete

involved_in

GO:0009252

peptidoglycan biosynthetic process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000058577

P

Seeded From UniProt

complete

enables

GO:0030234

enzyme regulator activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000058577

F

Seeded From UniProt

complete

part_of

GO:0031241

periplasmic side of cell outer membrane

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000058577

C

Seeded From UniProt

complete

involved_in

GO:0008360

regulation of cell shape

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0133

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0009252

peptidoglycan biosynthetic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0573

P

Seeded From UniProt

complete

part_of

GO:0009279

cell outer membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0998
UniProtKB-SubCell:SL-0040

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page