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SALTY:Q8ZQ08
Contents
Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
Gene Name(s) | lpoB (ECO:0000255 with HAMAP-Rule:MF_01889) | |
Protein Name(s) | Penicillin-binding protein activator LpoB (ECO:0000255 with HAMAP-Rule:MF_01889)
PBP activator LpoB (ECO:0000255 with HAMAP-Rule:MF_01889) | |
External Links | ||
UniProt | Q8ZQ08 | |
EMBL | AE006468 | |
RefSeq | NP_460177.1 | |
PDB | 4Q6L 4Q6V | |
PDBsum | 4Q6L 4Q6V | |
STRING | 99287.STM1207 | |
PaxDb | Q8ZQ08 | |
PRIDE | Q8ZQ08 | |
EnsemblBacteria | AAL20136 | |
GeneID | 1252725 | |
KEGG | stm:STM1207 | |
PATRIC | 32380863 | |
eggNOG | COG3417 | |
HOGENOM | HOG000119084 | |
KO | K07337 | |
OMA | EIVWSGN | |
OrthoDB | EOG6SJJMG | |
PhylomeDB | Q8ZQ08 | |
BioCyc | SENT99287:GCTI-1216-MONOMER | |
Proteomes | UP000001014 | |
GO | GO:0031241 GO:0030234 GO:0009252 GO:0008360 | |
HAMAP | MF_01889 | |
InterPro | IPR014094 | |
Pfam | PF13036 | |
TIGRFAMs | TIGR02722 | |
PROSITE | PS51257 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
part_of |
GO:0031241 |
periplasmic side of cell outer membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13431 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0030234 |
enzyme regulator activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13431 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009252 |
peptidoglycan biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13431 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050790 |
regulation of catalytic activity |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0030234 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050790 |
regulation of catalytic activity |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0030234 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009252 |
peptidoglycan biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000058577 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0030234 |
enzyme regulator activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000058577 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0031241 |
periplasmic side of cell outer membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000058577 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008360 |
regulation of cell shape |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009252 |
peptidoglycan biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page