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SALTY:Q8ZLZ4
Contents
| Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
| Gene Name(s) | tolC (ECO:0000313 with EMBL:AAL22060.1) | |
| Protein Name(s) | Outer membrane channel (ECO:0000313 with EMBL:AAL22060.1) | |
| External Links | ||
| UniProt | Q8ZLZ4 | |
| EMBL | AE006468 | |
| ProteinModelPortal | Q8ZLZ4 | |
| SMR | Q8ZLZ4 | |
| STRING | 99287.STM3186 | |
| PRIDE | Q8ZLZ4 | |
| EnsemblBacteria | AAL22060 | |
| PATRIC | 32385143 | |
| HOGENOM | HOG000283506 | |
| OMA | YNAKQQL | |
| OrthoDB | EOG6JHRGC | |
| BioCyc | SENT99287:GCTI-3206-MONOMER | |
| Proteomes | UP000001014 | |
| GO | GO:0019867 GO:0005215 GO:0015031 | |
| InterPro | IPR003423 IPR010130 | |
| PANTHER | PTHR30026:SF3 | |
| Pfam | PF02321 | |
| TIGRFAMs | TIGR01844 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
|
part_of |
GO:1990281 |
efflux pump complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0015562 |
efflux transmembrane transporter activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:1990281 |
efflux pump complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11009 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0015562 |
efflux transmembrane transporter activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11009 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0015288 |
porin activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11009 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0015562 |
efflux transmembrane transporter activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0019867 |
outer membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ 2.0 2.1 Song, S et al. (2014) Interaction mediated by the putative tip regions of MdsA and MdsC in the formation of a Salmonella-specific tripartite efflux pump. PLoS ONE 9 e100881 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
