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SALTY:Q8ZLU4

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Species (Taxon ID) Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287)
Gene Name(s) yraM (ECO:0000313 with EMBL:AAL22136.1) (synonyms: lpoA (ECO:0000256 with HAMAP-Rule:MF_01890))
Protein Name(s) Penicillin-binding protein activator LpoA (ECO:0000256 with HAMAP-Rule:MF_01890)

PBP activator LpoA (ECO:0000256 with HAMAP-Rule:MF_01890)

External Links
UniProt Q8ZLU4
EMBL AE006468
RefSeq NP_462177.1
ProteinModelPortal Q8ZLU4
STRING 99287.STM3264
PRIDE Q8ZLU4
EnsemblBacteria AAL22136
GeneID 1254787
KEGG stm:STM3264
PATRIC 32385315
HOGENOM HOG000125217
KO K07121
OMA FCETPWL
OrthoDB EOG66MQQ3
PhylomeDB Q8ZLU4
BioCyc SENT99287:GCTI-3285-MONOMER
Proteomes UP000001014
GO GO:0031241
GO:0030234
GO:0009252
GO:0008360
HAMAP MF_01890
InterPro IPR007443
IPR028082
Pfam PF04348
SUPFAM SSF53822

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009279

cell outer membrane

PMID:20149234[1]

ECO:0000314

C

Additional file 2: Comparison of the outer membrane proteins identified

complete

part_of

GO:0031241

periplasmic side of cell outer membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG12778
PANTHER:PTN002210975

C

Seeded From UniProt

complete

enables

GO:0030234

enzyme regulator activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG12778
PANTHER:PTN002210975

F

Seeded From UniProt

complete

involved_in

GO:0009252

peptidoglycan biosynthetic process

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG12778
PANTHER:PTN002210975

P

Seeded From UniProt

complete

involved_in

GO:0050790

regulation of catalytic activity

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0030234

P

Seeded From UniProt

complete

involved_in

GO:0050790

regulation of catalytic activity

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0030234

P

Seeded From UniProt

complete

involved_in

GO:0009252

peptidoglycan biosynthetic process

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0573

P

Seeded From UniProt

complete

part_of

GO:0009279

cell outer membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0998

C

Seeded From UniProt

complete

involved_in

GO:0008360

regulation of cell shape

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0133

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

enables

GO:0030234

enzyme regulator activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000058578

F

Seeded From UniProt

complete

involved_in

GO:0009252

peptidoglycan biosynthetic process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000058578

P

Seeded From UniProt

complete

part_of

GO:0031241

periplasmic side of cell outer membrane

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000058578

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page