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SALTY:OMPW
Contents
| Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
| Gene Name(s) | ompW | |
| Protein Name(s) | Outer membrane protein W | |
| External Links | ||
| UniProt | Q8ZP50 | |
| EMBL | AE006468 | |
| RefSeq | NP_460691.1 | |
| ProteinModelPortal | Q8ZP50 | |
| SMR | Q8ZP50 | |
| STRING | 99287.STM1732 | |
| TCDB | 1.B.39.1.1 | |
| PaxDb | Q8ZP50 | |
| PRIDE | Q8ZP50 | |
| EnsemblBacteria | AAL20650 | |
| GeneID | 1253251 | |
| KEGG | stm:STM1732 | |
| PATRIC | 32381977 | |
| eggNOG | COG3047 | |
| HOGENOM | HOG000217796 | |
| KO | K07275 | |
| OMA | PWVYMVG | |
| OrthoDB | EOG63RGQV | |
| PhylomeDB | Q8ZP50 | |
| BioCyc | SENT99287:GCTI-1741-MONOMER | |
| Proteomes | UP000001014 | |
| GO | GO:0009279 GO:0016021 | |
| Gene3D | 2.40.160.20 | |
| InterPro | IPR017690 IPR011250 IPR005618 | |
| Pfam | PF03922 | |
| SUPFAM | SSF56925 | |
| TIGRFAMs | TIGR03304 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
|
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002199661 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11124 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0019867 |
outer membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
