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SALTY:OMPD
Contents
Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
Gene Name(s) | ompD (synonyms: nmpC) | |
Protein Name(s) | Outer membrane porin protein OmpD | |
External Links | ||
UniProt | P37592 | |
EMBL | AE006468 D26057 | |
RefSeq | NP_460531.1 | |
ProteinModelPortal | P37592 | |
SMR | P37592 | |
IntAct | P37592 | |
STRING | 99287.STM1572 | |
PRIDE | P37592 | |
EnsemblBacteria | AAL20490 | |
GeneID | 1253090 | |
KEGG | stm:STM1572 | |
PATRIC | 32381646 | |
HOGENOM | HOG000272406 | |
KO | K16076 | |
OMA | KLEIGGR | |
OrthoDB | EOG65J4ZQ | |
PhylomeDB | P37592 | |
BioCyc | SENT99287:GCTI-1582-MONOMER | |
Proteomes | UP000001014 | |
GO | GO:0009279 GO:0046930 GO:0015288 GO:0006811 | |
Gene3D | 2.40.160.10 | |
InterPro | IPR017690 IPR023614 IPR001897 IPR001702 IPR013793 | |
Pfam | PF00267 | |
PRINTS | PR00183 PR00182 | |
TIGRFAMs | TIGR03304 | |
PROSITE | PS00576 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
enables |
GO:0015288 |
porin activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0015288 |
porin activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006811 |
ion transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0046930 |
pore complex |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
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